Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3315 |
Symbol | gspG |
ID | 1184973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3747197 |
End bp | 3747628 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637394665 |
Product | general secretion pathway protein G |
Protein accession | NP_793098 |
Protein GI | 28870479 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
TIGRFAM ID | [TIGR01710] general secretion pathway protein G [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.82991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTTTA GCCGTACACG CTTCAAACCC GCACGCCGAC AGGGCGGTTT CACGCTGTTG GAAATGCTCG CGGTTATCGT ATTGCTGGGC ATTGTCGCGA CCATCGTTGT GCGCCAGGTG GGCGGTAACG TTGACAAGGG CAAATACGGT GCAGGCAAGG CGCAACTCGC CAGCCTGGGC ATGAAGGTCG AAAGCTACGC GCTGGATGTC GGTTCGCCAC CCAAGACGCT GCAGCAGTTG ACCGAAAAGC CAGGTAATGC GTCGAACTGG AATGGCCCTT ATGCCAAGCC TTCGGACCTC AAAGACCCGT TCGGCCATGC GTTCGGTTAT CGCTTTCCGG GCCAGCATGG CAGCTTCGAC CTGATTTTCT ACGGCCAGGA CGGTCAGCCG GGTGGCGAAG GTTACAGCGC CGACCTGGGC AACTGGGAGT AA
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Protein sequence | MTFSRTRFKP ARRQGGFTLL EMLAVIVLLG IVATIVVRQV GGNVDKGKYG AGKAQLASLG MKVESYALDV GSPPKTLQQL TEKPGNASNW NGPYAKPSDL KDPFGHAFGY RFPGQHGSFD LIFYGQDGQP GGEGYSADLG NWE
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