Gene PSPTO_3295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3295 
SymbolpncA 
ID1184953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp3726505 
End bp3727155 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content63% 
IMG OID637394645 
Productpyrazinamidase/nicotinamidase 
Protein accessionNP_793078 
Protein GI28870459 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.20048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCTTT CCAACCAGCC TGCCGATCCT CGCTGCGCCC TGCTGGTGAT CGACATGCAG 
TACGACTTCA TGCCCGGCGG GCAGCTGGCG GTGGCTGACG GTGATGCGTT GCTGCCATTG 
ATCAATCGTC TGGGTGCGCG CTTTGCACGG GTGATCGTCA CTCAGGACTG GCACCCGGCC 
AGGCACATCT CGTTTGCCTC AAGCCATGCG CAGCGCGTGC CGTTCGAGAG CATCACCCTG 
CCCTACGGTC CGCAGACCCT GTGGCCGGAT CACTGCGTGC AAGGCAGCCA CGGTGCGCAA 
TTGCATGCCG ACCTCGATCT GCCTCACGCG CAGTTGATCC TGCGCAAGGG CTGCAATGCG 
CACATAGACA GCTACTCGGC GTTTCTGGAG GCAGACCGGT CAACCACCAC CGGGCTGGCC 
GGGTATTTGA AGGAGCGCGG TATCGACACG CTGTTCGTGG TCGGCCTGGC ACTGGACTTC 
TGTGTCGCGT GGTCTGCTCA GGATGCGCGC AGTGCCGGTT TCAATACGTA TGTCATTGAA 
GACGCCTGTC GCGCCATCGA CATGAACGGC TCGCTGGAGC ACGCCTGGAA GACACTGCTG 
GAGATGGGCG TCGAGCGCGT GCAAAGCGCC GATCTGCTGG GTCAGGCCTG A
 
Protein sequence
MPLSNQPADP RCALLVIDMQ YDFMPGGQLA VADGDALLPL INRLGARFAR VIVTQDWHPA 
RHISFASSHA QRVPFESITL PYGPQTLWPD HCVQGSHGAQ LHADLDLPHA QLILRKGCNA 
HIDSYSAFLE ADRSTTTGLA GYLKERGIDT LFVVGLALDF CVAWSAQDAR SAGFNTYVIE 
DACRAIDMNG SLEHAWKTLL EMGVERVQSA DLLGQA