Gene PSPTO_3281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3281 
Symbol 
ID1184939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp3707859 
End bp3708950 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content62% 
IMG OID637394631 
Productcarbohydrate diacid regulator, putative 
Protein accessionNP_793064 
Protein GI28870445 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3835] Sugar diacid utilization regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.173442 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGCCC TTGATCGAGC GCTGGCTCAG GACATCGTCG ACCGGGCGAT GGCCATTCTG 
CCGTACAACG TCAATGTCAT GGACTACTTG GGCATCATTA TCGGCAGCGG CGATCCAGAG 
CGTTTGTGCA TCCGCCACGA GGGGGCACAA CGGGTGTTGG CCAATGGTCA GGTGGTCGAG 
ATCGATTCGC TGGCGGCGAT GCGCCTGGGC GGTGTAAAAC CGGGCGTCAA TCTGCCCTTG 
ATGCTCGACC ATCAATTGGT GGGCGTGCTT GGCATCACCG GCGAGCCGGA CGAGGTCCGG 
GTCTATGGCG AATTGGTGAA GATGACGGCT GAAATGCTCA TGGAGCAACG TCGCCAGCAA 
GCCGACCTGC AATGGCGCGC GCAACGCAGT GAAGACCTGC TGGCTCGGCT GCTGTTGGCT 
GATTGCCCAG AAAGTCTGGT GGACGAAGCG CGGCAATTGG GCCTGCAACC GCATTTGCCG 
CGTCAGGCGG TGCTCATCCA GCTGGACGCA CCAGGGGCGT TCGCCAGTCA GATTGCAACC 
TGGCTTGGCT CGCGTTACGC CGACAGTTGG TGCGTGCTGC GTGAGCCCAC GTTGCTGTAT 
TGGTGCCGCG CGGTGGGCAA GGAACGTGAC GACGGCGTGC TGCTCAAGCA ATTGGATGAG 
CACGGCTGGC CAGTCCTGCG CATGGCCACA GTGGGTCAAT CTCCGGATTT GCCCACATTG 
CGCAATGCCT GCGCGGCGGC GCGCGATCTG CTGGACTACG CCACTCAGGC CAGACCGGGG 
CAACGCATTC TGCGTCTGGA GGCGCACCGT CTGCCGGTGC TGTTCTGGCG CTACCGCCAT 
GACTGGCTGG CCGAAGAAGT GGCCGAGCCG ATTGGCCGTT TGCACAATCA TGTGCAACTG 
CTCGACACCC TGTGCAAATG GTTCGAGTAC AGCGGCGAAA GCCAGGCCTG CGCCGAGGCC 
CTGGGCATTC ATCGCAACAG CCTGCGCTAC CGACTGGAGA AAATAGCCGA ACTGACGGGC 
TGCGATCCCT ACAAGACCGA TGACCTGCTG CGCCTGTATC TGGGCGCGCA GATGATGGCT 
CGTCATGAAT AA
 
Protein sequence
MFALDRALAQ DIVDRAMAIL PYNVNVMDYL GIIIGSGDPE RLCIRHEGAQ RVLANGQVVE 
IDSLAAMRLG GVKPGVNLPL MLDHQLVGVL GITGEPDEVR VYGELVKMTA EMLMEQRRQQ 
ADLQWRAQRS EDLLARLLLA DCPESLVDEA RQLGLQPHLP RQAVLIQLDA PGAFASQIAT 
WLGSRYADSW CVLREPTLLY WCRAVGKERD DGVLLKQLDE HGWPVLRMAT VGQSPDLPTL 
RNACAAARDL LDYATQARPG QRILRLEAHR LPVLFWRYRH DWLAEEVAEP IGRLHNHVQL 
LDTLCKWFEY SGESQACAEA LGIHRNSLRY RLEKIAELTG CDPYKTDDLL RLYLGAQMMA 
RHE