Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3273 |
Symbol | |
ID | 1184931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3698579 |
End bp | 3699079 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637394623 |
Product | hypothetical protein |
Protein accession | NP_793056 |
Protein GI | 28870437 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG3613] Nucleoside 2-deoxyribosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0797812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGCGC CATTGGTTTA TCTGGCTGGG TTCGACGTGT TTCGACCCGA TGCGATCGAG TACGGTCGCT ACCTCAAGGC GTTGTGCGCG GCGCATGGGC TTGAAGGGCT GTATCCGTTC GACAGCGAGG TGACGCCGGG GCAAACGCTG CATGAAACCG CGCGGCAGAT TTATGCGATG AATGTCGCGA TGATTCAGCG CTGTTCTGCG GTGCTGGCCA ATCTGAATGT GTTTCGCGGC CTGGAGCCGG ACTCGGGCAC TGCGTTTGAA GTGGGTATGG CTGTGGCGTT GAACAAGCCG GTGTGGGTGT ACTTTGAGCC GGTGGCTTCG CTGCGCGAAC TGGTCGTTCA TGACGACAAC GGTCTGGACC GGAACGGTTT TACGGTTGAG GACTTTGAAC TGCCGCGTAA TCTGATGCTC GCCTGCAGTT GGGCGGGAAC CAGTTCGACG GTGGAGCTTG GGGCTGAGGC GCTGGCGAAG TACTTGAGTG AGCGTGTTTG A
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Protein sequence | MQAPLVYLAG FDVFRPDAIE YGRYLKALCA AHGLEGLYPF DSEVTPGQTL HETARQIYAM NVAMIQRCSA VLANLNVFRG LEPDSGTAFE VGMAVALNKP VWVYFEPVAS LRELVVHDDN GLDRNGFTVE DFELPRNLML ACSWAGTSST VELGAEALAK YLSERV
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