Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3258 |
Symbol | |
ID | 1184916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3682282 |
End bp | 3683073 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637394608 |
Product | iron ABC transporter, ATP-binding protein |
Protein accession | NP_793041 |
Protein GI | 28870422 |
COG category | [H] Coenzyme transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.047532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAGT TTGCGCAGTC GCCCCGCTCT TGCGTGCTCG GTTGCTCCGG GCTCGGCTAT TCGGTGCGTG GCACGCCCCT GCTGAGCGAT GTCGATCTGA GCATTGCCAC AGGCGAGACA CTCGCGGTGG TCGGCCCTAA TGGTTCGGGC AAATCCACCC TGCTCAAGCT GCTGGCTGGC ATTCAGAAGC CGGGCAGCGG CGCGGTCAGG CTGGGTGAGC AGGCACTCGC CGCGATGAGC CGCAGAGACG TGGCACGCCT GTTGGCGGTG GTCGAGCAGC AGGCCGAAAC CAGCGACGCG GTGACCGTGC TCGACGCCGT CGAACTGGGC CGCACGCCCT GGCTGTCGGC ACTGGAGCCG TGGAGCGCGA ATGACGACGC CATCGTGCGT CAGGCCTTGC AGGATGTGGA CATGCTGCAC ATGCAAAAAC GGGCCTGGCA CACCCTGTCC GGGGGCGAGC GGCAACGTGT GCACATCGCC CGAGCGCTGG CACAACGGCC GCAAATTCTG CTGCTGGATG AGCCGACCAA TCATCTGGAC ATCCAGCATC AGCTCACTAT TCTCGGCCTG GTCAGGGCTT TGCCGGTGAC CACGGTGATT GCCCTGCATG ACCTGAATCA GGCACTGGAC TGCGACCGTG TCGCCGTTAT GGAAAAAGGC CGACTGGTGG CGCTGGGCAC GCCGGTCGAG GTACTGACGC CCAAGCGCCT ACTGAGCACC TTCGGCGTCG TGGCGCACTG GCTGACCGAC CCCTTCGATG GCGCGAAAAT CCTGCGCTTG CGCTCGCGCT GA
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Protein sequence | MNEFAQSPRS CVLGCSGLGY SVRGTPLLSD VDLSIATGET LAVVGPNGSG KSTLLKLLAG IQKPGSGAVR LGEQALAAMS RRDVARLLAV VEQQAETSDA VTVLDAVELG RTPWLSALEP WSANDDAIVR QALQDVDMLH MQKRAWHTLS GGERQRVHIA RALAQRPQIL LLDEPTNHLD IQHQLTILGL VRALPVTTVI ALHDLNQALD CDRVAVMEKG RLVALGTPVE VLTPKRLLST FGVVAHWLTD PFDGAKILRL RSR
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