| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3170 |
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| Symbol | |
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| ID | 1184827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3560854 |
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| End bp | 3563547 |
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| Gene Length | 2694 bp |
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| Protein Length | 897 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394526 |
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| Product | glycosyl hydrolase, family 3 |
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| Protein accession | NP_792960 |
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| Protein GI | 28870341 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.541746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCAGCGT TCAAACAGAC CCTGGGCCTG AGCCTGCTGA CGTTCAGCGT CATGCAGGCC
CACCTCGCGC TCGCCGCAGT GACACCGGCC ACCGGCAACG CAGTCGAAGC CCGCGTCAGC
TCGATTCTCG ACAACATGAA TCAGTCCGAG AAGATCAACT TTACCCGCGT GAATGACGGG
CACATGATCC CTTCTCTACT CAAGTGGGGC ATCAAGGGCA CCGTGGCGTA TGACTCGTCG
ATGGGCGTGC ACGTCAACAA CGCCACCTTT GGCGCGCAGT ACCCGTCGCA GTCCGCGCTG
GCTGCCACCT GGAGCATCAA CCGGGCCAAG GAATTCGGTC TGGCCATTGC CTACGAGACG
CGTATTTCCG GTGGCCAGCA GATGCTCTCG CCTGGCGCAA ACCTGTACCG CACCCCGTAC
AACGGCCGCT CGGCAGAGTA CGTCAGTGGC GAGGACCCGT TCCTCGGCGC GGTCATGGCA
CCGGCCATCG TCAACGCCAT TCAGGCGCAA GGCATTCAGG CCAGCGGCAA GCATTACCTG
GCCAACGAGC AGGAAGCCAA TCGCCAGGCC GTCGACGTCA AGGTCGATGA GCGCACCCTG
CGCGAACTGT ATTTGCCGGG CTTCGAGTCG ATGGTCAAGA ACGCCAACGT GGCGTCGATC
ATGTGCGGTT TCAACAAGGT CAATGGCGAC TACGCGTGCG AAAACCATCA CCTGATCACC
GAGGTGCTCA AGGGTGAATG GGGCTATCAA GGCACGGTAA TCAGTGACTT CAACGCCATT
CACGACGCGT TCAAGGGCGC TTGGGCCGGC ACCGACATCG ATATGCCGTC GGGCCTGCAA
TTCACCGAAG CCAAGCTGCT GCCTTACCTG TGGAGCGGGC AACTGACCCA GAACGTGATC
GACGACAAGG TCAAGCGCAA CCTGCGGGCC ATCGTCAGCT ACGATTTCCA GGAAAACCTT
AATACCGCCA AGACCCTGGA CCACCCCGAG TACGGCATGC GCGCAGCGCT GAATACCGCG
CGTGAGTCCA TCGTTCTGCT GCGTAACGAA AACACTGCGG CGGGCAAACC GCTGCTGCCA
CTGGCGCGCT CGGCGAAGAT CGCCGTGATC GGCAACTGGG CACATGAAAC ACCTGCGTCA
CCATTCGGCA CGGCCAACTC GCCGCCCAAC AGCTACGTCA CCGAACTGAG CGGCCTGCAG
CAACTGGCGT CCAACAGCAC CGACGTCACC TACCTCCCGG AAATGAGCCT GAACCCGGCG
AATTCGACCT GGTATCAGCC AGCCACGGGT AACAACAGCA TCAGCAATTC CGGGGTTAAA
GCCGAGTATT TCTCCAACAC CAGCTTTTCC GGCGATCCGG CACTGACGCG CGTCGAGCCA
GGCGTAAACC TGAACTGGGC CACCGGCACC AACGTCACCA ATGCGGGCAG CACGGCCGTG
TCGGGCTTTA GCCCTTCAGC CGGTGCCTTC TCGGCCCGCT TCACGGCGAC CATCAAGCCG
ACTGTCTCGG GCGCACAGGT GTTCAAGGTT CGCGCCGATG GCCCTTACAA GCTGTGGGTC
AACGATGAGC TGGTACTGCA GAGCGATGGC GTGCCTTACT CAGGCGACGT CGTGAACGCG
CTGACAACGT CGGGGAAAAC TGCTGAATTG AGTGCTGGCA AGACCTACAC CGTAAAACTT
GAATACCAGC GCATTCAGGG CAATTTCATT CCTGTGCTGG GCGGCCTGAC CGGTGTGCAG
ATGAGCTGGG CATCGTTGCG TCCGCCGAAG GATCTGTCGA GCTACGATGC GGTCGTGGTT
GCCACCGGCA CTACGTCTGA AAACGAAGGC GAAGGTTCTG ACCACGGTTT CGATCTGCCT
GACCAGCAAG CAGAGCTGAT CAGCTACGTC ACCAAGGCCA ACCCCAATAC CATCGTGGTC
ATGCATGGCG GTGGTGTGGC CAACATGCAA CCGTGGGCGA ACAAGGTCGG CGCGACGCTG
CAAGCCTGGT TCCCGGGTCA GCAAGGCGGG CAGGCTCTGG CCGAGATTCT GTATGGCAAG
GTCAACCCGT CGGGCAAACT GCCGATCACC ATCGACAAGA AAATCGAGGA TAACCCAAGC
TACGCGTCCT ACCCGGACCC GGCGGCCTAT CGTGGCGACA ATGCTCTGAC CGAAATGACC
TACAGCGAAG GCCTGTACAT GGGTTATCGC GGTTATGACA AGAAGCACGC CAAGCCGCTG
TACCCGTTCG GTTACGGGCT GTCCTACACC ACGTTCAGCT ACAGCGACCT CAAGCTGTCG
ACCAACGTGC TGACCCCGGG CGCGACGATT GACGTCAAGT TCACCGTGAC CAACACCGGC
GACAAGGCAG GCTTTGAAGT GGCACAGCTT TACGTGCAAC CGGTAAAACC GGCTGTAGAC
CGTCCGGAGA AAGAGCTCAA GGGCTTTACC AAAGTCTATT TGCAGCCCGG TGAGAGCAAG
ACGGTCAGCG TGCCGATCGA CTCGCGTTCG CTGGCCTACT ACGTCGACAA GACCGCAAGC
TGGGACGTTG ACGCCGGCAA GTTCAAGATT CTGGTGGGTG CAGATTCGGA GAACCTGACC
CTCGACCGGA CCCTGATTAC CCTGTACCCG GAAAAGCTGA CCACCCGCGA CAGCAACCCG
CTGCCGTTGC CACTGCGCAA GGCAGTACAG GTCAGCGCGG CACAGACGTA CTGA
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| Protein sequence | MSAFKQTLGL SLLTFSVMQA HLALAAVTPA TGNAVEARVS SILDNMNQSE KINFTRVNDG
HMIPSLLKWG IKGTVAYDSS MGVHVNNATF GAQYPSQSAL AATWSINRAK EFGLAIAYET
RISGGQQMLS PGANLYRTPY NGRSAEYVSG EDPFLGAVMA PAIVNAIQAQ GIQASGKHYL
ANEQEANRQA VDVKVDERTL RELYLPGFES MVKNANVASI MCGFNKVNGD YACENHHLIT
EVLKGEWGYQ GTVISDFNAI HDAFKGAWAG TDIDMPSGLQ FTEAKLLPYL WSGQLTQNVI
DDKVKRNLRA IVSYDFQENL NTAKTLDHPE YGMRAALNTA RESIVLLRNE NTAAGKPLLP
LARSAKIAVI GNWAHETPAS PFGTANSPPN SYVTELSGLQ QLASNSTDVT YLPEMSLNPA
NSTWYQPATG NNSISNSGVK AEYFSNTSFS GDPALTRVEP GVNLNWATGT NVTNAGSTAV
SGFSPSAGAF SARFTATIKP TVSGAQVFKV RADGPYKLWV NDELVLQSDG VPYSGDVVNA
LTTSGKTAEL SAGKTYTVKL EYQRIQGNFI PVLGGLTGVQ MSWASLRPPK DLSSYDAVVV
ATGTTSENEG EGSDHGFDLP DQQAELISYV TKANPNTIVV MHGGGVANMQ PWANKVGATL
QAWFPGQQGG QALAEILYGK VNPSGKLPIT IDKKIEDNPS YASYPDPAAY RGDNALTEMT
YSEGLYMGYR GYDKKHAKPL YPFGYGLSYT TFSYSDLKLS TNVLTPGATI DVKFTVTNTG
DKAGFEVAQL YVQPVKPAVD RPEKELKGFT KVYLQPGESK TVSVPIDSRS LAYYVDKTAS
WDVDAGKFKI LVGADSENLT LDRTLITLYP EKLTTRDSNP LPLPLRKAVQ VSAAQTY
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