Gene PSPTO_3163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3163 
Symbol 
ID1184820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3555900 
End bp3556673 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content60% 
IMG OID637394519 
Productenoyl-CoA hydratase/isomerase family protein 
Protein accessionNP_792953 
Protein GI28870334 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.236024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTACG AGACAATCCT CAGTGAGGTT GTAGGCAGCG TCGGGCTGGT CACTTTGAAC 
CGTCCCAAGG CCCTGAACGC ACTGAATGCT CGTCTGATCG ACGAGTTGAA CCACGCGCTT
GACCAGTTCG AGGCGGACAG CGCCATTGGC TGTATCGTGC TGACCGGCAC GCAAAAAGCC
TTCGCTGCGG GGGCTGACAT CAAGGAAATG GTCGAGCTCT CCTACCCGCA GATCTACCTC
GATGACCTGT TTCGTGAAAG TGACCGCGTG GCCGCGCGGC GTAAACCGAT GGTCGCGGCC
GTGGCCGGTT TCGCGCTGGG CGGTGGCTGT GAATTGGCAC TGATGTGTGA CTTCATTCTG
GCTGCCGAAA ACGCCAGGTT TGGTCAACCG GAGATCAACC TCGGCGTGTT ACCGGGCATG
GGCGGGACGC AACGTCTGAC CCGTGCGGTT GGCAAGGCCA AGGCAATGGA AATGTGCCTG
ACAGGCCGCC TGATCGACGC CCATGAAGCC GAGCGCGCGG GTCTGGTGTC CCGCGTCTTG
CCGCTTGACC AGCTACTGCC CGAAGCACTT GCAGTGGCCG CCACCATCGC CGCGAAATCG
CTGCCGGTGG CGATGATGGT CAAGGAGAGC GTCAACCGCG CTTTTGAGGT GAGCCTGGCT
GAAGGTATCC GTTTCGAGCG CCGGGTGTTC CATGCGGCCT TCGCCAGTCA CGACCAGAAA
GAAGGCATGC AAGCGTTTAT CGACAAGCGC CAGCCGGATT TCAAGGACTG TTAG
 
Protein sequence
MDYETILSEV VGSVGLVTLN RPKALNALNA RLIDELNHAL DQFEADSAIG CIVLTGTQKA 
FAAGADIKEM VELSYPQIYL DDLFRESDRV AARRKPMVAA VAGFALGGGC ELALMCDFIL
AAENARFGQP EINLGVLPGM GGTQRLTRAV GKAKAMEMCL TGRLIDAHEA ERAGLVSRVL
PLDQLLPEAL AVAATIAAKS LPVAMMVKES VNRAFEVSLA EGIRFERRVF HAAFASHDQK
EGMQAFIDKR QPDFKDC