Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3163 |
Symbol | |
ID | 1184820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3555900 |
End bp | 3556673 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637394519 |
Product | enoyl-CoA hydratase/isomerase family protein |
Protein accession | NP_792953 |
Protein GI | 28870334 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.236024 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTACG AGACAATCCT CAGTGAGGTT GTAGGCAGCG TCGGGCTGGT CACTTTGAAC CGTCCCAAGG CCCTGAACGC ACTGAATGCT CGTCTGATCG ACGAGTTGAA CCACGCGCTT GACCAGTTCG AGGCGGACAG CGCCATTGGC TGTATCGTGC TGACCGGCAC GCAAAAAGCC TTCGCTGCGG GGGCTGACAT CAAGGAAATG GTCGAGCTCT CCTACCCGCA GATCTACCTC GATGACCTGT TTCGTGAAAG TGACCGCGTG GCCGCGCGGC GTAAACCGAT GGTCGCGGCC GTGGCCGGTT TCGCGCTGGG CGGTGGCTGT GAATTGGCAC TGATGTGTGA CTTCATTCTG GCTGCCGAAA ACGCCAGGTT TGGTCAACCG GAGATCAACC TCGGCGTGTT ACCGGGCATG GGCGGGACGC AACGTCTGAC CCGTGCGGTT GGCAAGGCCA AGGCAATGGA AATGTGCCTG ACAGGCCGCC TGATCGACGC CCATGAAGCC GAGCGCGCGG GTCTGGTGTC CCGCGTCTTG CCGCTTGACC AGCTACTGCC CGAAGCACTT GCAGTGGCCG CCACCATCGC CGCGAAATCG CTGCCGGTGG CGATGATGGT CAAGGAGAGC GTCAACCGCG CTTTTGAGGT GAGCCTGGCT GAAGGTATCC GTTTCGAGCG CCGGGTGTTC CATGCGGCCT TCGCCAGTCA CGACCAGAAA GAAGGCATGC AAGCGTTTAT CGACAAGCGC CAGCCGGATT TCAAGGACTG TTAG
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Protein sequence | MDYETILSEV VGSVGLVTLN RPKALNALNA RLIDELNHAL DQFEADSAIG CIVLTGTQKA FAAGADIKEM VELSYPQIYL DDLFRESDRV AARRKPMVAA VAGFALGGGC ELALMCDFIL AAENARFGQP EINLGVLPGM GGTQRLTRAV GKAKAMEMCL TGRLIDAHEA ERAGLVSRVL PLDQLLPEAL AVAATIAAKS LPVAMMVKES VNRAFEVSLA EGIRFERRVF HAAFASHDQK EGMQAFIDKR QPDFKDC
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