| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3156 |
|---|
| Symbol | |
|---|
| ID | 1184813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 3548894 |
|---|
| End bp | 3549361 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637394513 |
|---|
| Product | transcriptional regulator, AsnC family |
|---|
| Protein accession | NP_792947 |
|---|
| Protein GI | 28870328 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000033258 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCTTA AATTGAGCCC CATCGATCGC AGGATTCTTC GCCTGCTGCA ACATGACGCC
AGCCTCTCGG CGGCAGAAAT CGCGGAACGT GTAGAGCTGT CGCAATCACC CTGCTGGAGG
CGTATTCATC GGCTGCAGGA GGACGGCGTG ATCGAGCGCA CGGTCGCCCT GCTCAGCACG
CAAAAACTCG GCCTGAGCAT GACCGTCTTC GTCGAGGTCA AGCTGTCGGG GCATGGCCGG
CGTTATCTGG CCGAATTCGA AGAGGCGATC ATCGGCCACC CCGAGGTGCT GGAGTGCTAC
ACAATGGCGG GCGGGATGGA CTTCATGCTC AAGGTGGTGG CTCAGGACAT CGCCAGCTAT
GAGCGCTTTC TGCGCGACCA CCTGCTGCAA TTGCCCCACG TGCACGAGGC GCATTCGAAT
ATCGCCATGA GCACGGTGAA ACGCACCACA GAGCTGCCGC TGGATTAG
|
|---|
| Protein sequence | MQLKLSPIDR RILRLLQHDA SLSAAEIAER VELSQSPCWR RIHRLQEDGV IERTVALLST
QKLGLSMTVF VEVKLSGHGR RYLAEFEEAI IGHPEVLECY TMAGGMDFML KVVAQDIASY
ERFLRDHLLQ LPHVHEAHSN IAMSTVKRTT ELPLD
|
|---|
| |