Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3136 |
Symbol | |
ID | 1184793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3525969 |
End bp | 3526577 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637394494 |
Product | acyl carrier protein phosphodiesterase |
Protein accession | NP_792928 |
Protein GI | 28870309 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00683712 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATTC TGCACCTTGA TTCCAGCATC CTCGGCGATC ATTCCGCTTC GCGTCAGCTG TCCCGTGATG TTGTCGAGGC TTATAAAAGC ACCCACGCCG ATAGCCACGT GACCTATCGC GATCTGGCCA GCGAAGCCCT GGGGCATTTC TCTGCGGCCA GCCTTGCCGC AGCGGGCACT CCGGTAGAAG CACGTGATGC CGCTCAGCAG CAGGAAGTCG ACAATAACGA AGCCACGTTG CAGCAGTTTC TCGACGCCGA CGTGCTGGTG ATCGGTGCGC CGATGTACAA CTTCAGCATT CCGTCGCAGT TGAAAGCGTG GATTGATCGC ATTGCTGTTG CGGGTCGCAC TTTCCGTTAT TCCGAAGCCG GGCCTGAAGG CCTGTGCGGC GGCAAGAAAG TCATTATCGT TTCCACTTCC GGTGGCCTGC ATCAAGGGTT GCCAACCGGT GCAGGCCACG AAGAGCTGCT CAAGGCACTG TTTGCCTTCA TCGGTATCAC CGACCTGCAG TTCGTTCGCG CACACGGCCT GGCGTATGGC GAAGAGCCTC GCGCCAACGC CATGGCCGCC GCGAAGCAGC AGATCGAGAG CGAGCTGTTG GCCGCCTGA
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Protein sequence | MNILHLDSSI LGDHSASRQL SRDVVEAYKS THADSHVTYR DLASEALGHF SAASLAAAGT PVEARDAAQQ QEVDNNEATL QQFLDADVLV IGAPMYNFSI PSQLKAWIDR IAVAGRTFRY SEAGPEGLCG GKKVIIVSTS GGLHQGLPTG AGHEELLKAL FAFIGITDLQ FVRAHGLAYG EEPRANAMAA AKQQIESELL AA
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