| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3128 |
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| Symbol | |
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| ID | 1184785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3515934 |
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| End bp | 3518717 |
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| Gene Length | 2784 bp |
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| Protein Length | 927 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394486 |
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| Product | glycosyl hydrolase, family 13 |
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| Protein accession | NP_792920 |
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| Protein GI | 28870301 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3280] Maltooligosyl trehalose synthase |
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| TIGRFAM ID | [TIGR02401] malto-oligosyltrehalose synthase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.216246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGTC CACTACAGCC TTTGCGCGCC ACCCAGCGCC TGCAATTTCA TAAAGACTTC
ACCCTTGATG ACGCCGTGCC ACTGGTGCCC TACTTCGCCA GCCTTGGCAT CAGTCATATC
TATGCGTCGC CATTGCTCAA GGCCCGCGCG GGCTCCATGC ATGGCTACGA TGTAGTCGAC
CCGACCGTCA TCAACCCGGA GCTGGGCGGC GAACCTGCCC TGTTGCGCCT GGTATCGACC
CTGCGCGAAC ACGGCATGGG CCTGATACTT GATATCGTGT CCAACCACAT GGCCGTCGGC
GGCGCCGATA ACCCATGGTG GCTGGACCTG CTGGAGTGGG GGCGTCGCAG CCCTTACGCA
GATTTCTTCG ACATCCAGTG GAACTCCCCG GACCCGCTGC TGGAAGGCCA ATTGTTGCTG
CCGTTTTTGA GCACTGATTA CGGCACCGTG CTGCAGGCCG GAGAAATCCC CTTGCGCTTC
GACGCCGAGC GCGGCGCGTT TTACATCGAG CACTACCAGC ATCACTTCCC GATCTGCCCG
CTGACGTATG ACTTGTTATT GCAGACAGTG GAACACCCGC AACTGAAGGA AGTGGCGCAG
CGCTTCACCG CGCTGGCCCA ATACCCGCAG GCGTATGAAC GCGCACGTCA GGCGAGGGCC
GAGTTGGCTG AACTGGCCAA GGATGCGCAG GTTTCGCAGG CTATCGAGCA GATTCTTGCG
CACTTCGACT CCAGCAAACC GGAGGGTTTC CAGCGTCTGC ATCAGTTGCT TGAACGTCAG
CATTATCGTT TGGCCAGCTG GCGTACCGCT GGTGATGACA TCAACTGGCG GCGCTTTTTC
GACATCAACG AGCTGGGCGG CTTGCGCGTC GAGCGGCCGC AGGTCTTCGA GGCCACTCAC
GGCAAAATCT TTCAGTTGAT CGCGGACGGC CTGGTTGACG GGCTGCGTAT CGATCACATT
GACGGCCTGG CCAACCCGCG CGGCTATGGC CGCAAATTGC ATCGCCGGGT CAAAAGTCTG
TTGAAGCAGC GCCCTGCCGA GGCGCAAATT GAACATTTGC CGATCTTCGT CGAGAAAATC
CTCGGCCCGG ATGAGCCGCT GCGCGAGGAC TGGAGCGTAG ACGGCACGAC CGGTTACGAA
TTCATGAATC AGGTGTCGCT GCTGCAACAC GATCCCAAGG GCGAAGAGCC GCTGGGCGAG
CTGTGGAGCC GACTGGCAGA GCGTACCGCT GACTTTGATC AGGAAGTGCT GGTGGCCCGC
GATCTGGTGC TGCACGGCAC GCTGGCGGGC GATTTCGAGA ACGTCGCGCA GTCATTGCTG
CAAGTGGCAC GCAGCGACCT GATGAGCCGC GACCTGACAC TGGGGGCGAT TCGCCGGGCC
TTGCTGGCGC TGGTGGTGAA TTTCCCGATC TACCGCACCT ACATTTCGGT GTGCGGTCGC
TCTGAACAAG ATGATCGTTA CTTCCAGCAG GCCATGGAAG GCGCTCGTAC CACGCTGAAC
GAAGGCGACT GGCCGGTGCT CGATTATCTG GCACGCTGGC TGGGCGGCGA GTCATGGCGA
CAACTGCCGC GCGGGCACCT GCGCAAGCTG TACAAGAATG CCTGCGTGCG CTTCCAGCAG
TTGACCTCCC CTGTCGCCGC CAAGTCGGTC GAGGACACCT CTTTCTACCG CTCTGCGGTG
CTGCTGTCGC GCAACGATGT GGGCTTTCAT CCGCAGCATT TCAGCGCCCC GGTGGAGGAC
TTCCACGCAG TCTGCCTGGA GCGTCTGGAA AAATTCCCTG ACAATTTGCT GACCACCGCC
ACCCATGACC ACAAGCGCGG CGAAGACACC CGTACACGCC TTGCGGTACT GAGTGAATGT
GCGCCGTGGT ACGCCGAACA GGTTGAGCGC TGGCGACAGC TGGCCGTGCC GCTGAAAGGT
GACGAGCCCG CTATCAGTGC GGGCGATGAG TTGATGCTCT ATCAGGCACT GCTGGGCAGC
TGGCCGCTAA GCCTGGAAGG CGAACAAGCC CATCAGGATT ACGCCAAGCG TATGGTCCAG
TGGCAGGAAA AAGCCCTGCG CGAAGCCAAG CTGCAAAGCA GCTGGAGCGC GCCTAACCAG
CCTTACGAAA CGGCCTGCCG CGAGTTTCTG GATCGCCTGC TGCTCGCGCC AGAAGCGCTT
GCGCTGCGTC AGTCCCTGAG TGCGACGGCC AACCGTATTG CCACCGCTGG TGCGCTCAAC
AGTCTGGCGC AAACCTTGCT ACGCTTGAGC GTGCCCGGCG TGCCCGATTT GTATCAGGGC
GCCGAGTTCT GGGATTTTAG TCTGGTGGAT CCGGACAACC GCCGGCCGGT GGATTATGCA
GCCCGGCAGA AGGCGCTGGC GCAGGACGCT AGCGCTGCCG ACCTGTTGAG CAACTGGCAG
GATGGCCGGA TCAAACAGGC GCTGATCTCG AAGGTGCTGA ACCTGCGGGC CCAGTACCCG
GCGCTGTTCA GTGAGGGGAG CTACCAGCCC CTTGAGATAA AGGGGAGCCA CGCCGATCAG
GTGATGGCGT TTGCCCGGGA GACGCAAGGA GTGCGCGCTG TCATCGTAGT CCCACGCATA
AGCAGTGAAC TATTGGGTAC CGCACAAACT CCATTGATTA ATGCTGCCAA TTGGGGCGAC
ACGCGGATAA TGTTGCCGTT TGCCGATTCC GATTCTGACT GGAAGGGGCT CTTTTCTGAC
GTTGTGGTAA TGACTGATCG GGAAATACCG CTCAGTGCAG CGCTTGAAAG ATTTTCCGTC
AATTTGCTTA TTCAAACTAC GTAA
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| Protein sequence | MNRPLQPLRA TQRLQFHKDF TLDDAVPLVP YFASLGISHI YASPLLKARA GSMHGYDVVD
PTVINPELGG EPALLRLVST LREHGMGLIL DIVSNHMAVG GADNPWWLDL LEWGRRSPYA
DFFDIQWNSP DPLLEGQLLL PFLSTDYGTV LQAGEIPLRF DAERGAFYIE HYQHHFPICP
LTYDLLLQTV EHPQLKEVAQ RFTALAQYPQ AYERARQARA ELAELAKDAQ VSQAIEQILA
HFDSSKPEGF QRLHQLLERQ HYRLASWRTA GDDINWRRFF DINELGGLRV ERPQVFEATH
GKIFQLIADG LVDGLRIDHI DGLANPRGYG RKLHRRVKSL LKQRPAEAQI EHLPIFVEKI
LGPDEPLRED WSVDGTTGYE FMNQVSLLQH DPKGEEPLGE LWSRLAERTA DFDQEVLVAR
DLVLHGTLAG DFENVAQSLL QVARSDLMSR DLTLGAIRRA LLALVVNFPI YRTYISVCGR
SEQDDRYFQQ AMEGARTTLN EGDWPVLDYL ARWLGGESWR QLPRGHLRKL YKNACVRFQQ
LTSPVAAKSV EDTSFYRSAV LLSRNDVGFH PQHFSAPVED FHAVCLERLE KFPDNLLTTA
THDHKRGEDT RTRLAVLSEC APWYAEQVER WRQLAVPLKG DEPAISAGDE LMLYQALLGS
WPLSLEGEQA HQDYAKRMVQ WQEKALREAK LQSSWSAPNQ PYETACREFL DRLLLAPEAL
ALRQSLSATA NRIATAGALN SLAQTLLRLS VPGVPDLYQG AEFWDFSLVD PDNRRPVDYA
ARQKALAQDA SAADLLSNWQ DGRIKQALIS KVLNLRAQYP ALFSEGSYQP LEIKGSHADQ
VMAFARETQG VRAVIVVPRI SSELLGTAQT PLINAANWGD TRIMLPFADS DSDWKGLFSD
VVVMTDREIP LSAALERFSV NLLIQTT
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