Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3122 |
Symbol | gnd |
ID | 1184779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3507739 |
End bp | 3508713 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637394480 |
Product | 6-phosphogluconate dehydrogenase |
Protein accession | NP_792914 |
Protein GI | 28870295 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1023] Predicted 6-phosphogluconate dehydrogenase |
TIGRFAM ID | [TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) [TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.141391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACTTG GGATTATTGG ACTGGGCCGC ATGGGCGGCA ACATTGCACG GCGACTGATG CTGGATGGTC ACACTACAGT GGTGTATGAC CGCGATGAGG CATCACGCGG CGCCTTGGCC AATGAGGGCT CTACTGCCGT CGCTGATCTG GCGGAACTGG TGAGTGCACT GGAAAAGCCC CGTGCAGTCT GGGTCATGCT CCCGGCAGGC GCTCCGACCG AAGACACCAT TCAGACCCTC AGTCAGTTGC TTGAAGCCGA CGACGTGATC ATCGATGGCG GTAACACCTT CTACAAGGAC GACATTCGTC GTGCGCAGGA ACTGAGCGAA AAAGGCCTGC ACTATGTCGA TGTCGGCACG TCCGGTGGCG TCTGGGGCCT TGAACGCGGC TACTGCATGA TGATCGGTGG CGACGTGGCG GCAGTCGAGC GTCTTGATCC GCTGTTCGCG TCCCTCGCAC CCGGCCTTGG TTCGATCGAG CGCACTCGCG GTCGTACCTC GACCGACGAC CGCGCAGAGC GTGGCTACAT CCACTCAGGC CCTGCAGGTT CGGGGCATTT CGTGAAGATG ATCCACAACG GCATCGAGTA CGGAATGATG CAGGCCTTCG CCGAAGGCTT CGACCTGCTC AAGCAGAAAA ACTCCGAGCA TCTGCCGGCC GAGCAGCGTT TCGACCTCAA CACTGCAGAC ATTGCCGAGG TCTGGCGTCG TGGCAGTGTG GTTTCATCCT GGCTGCTCGA CCTGACCGCC GATGCCCTGG CGACTGACCC GCAACTCGAC GCTTTTTCCG GCTCGGTCGC CGACAGTGGT GAAGGACGCT GGACCATCGA GGCGGCGATC GAGCAGGCCG TACCGGTTCC GGTGCTCTCC AGCGCCTTGT TCGCGCGCTT CCGCTCCCGT CAGACAAGCT CGTATGCAGA CAAGATGCTG TCTGCCATGC GCTTTGGATT TGGTGGCCAC AAGGAACCCA AGTAA
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Protein sequence | MQLGIIGLGR MGGNIARRLM LDGHTTVVYD RDEASRGALA NEGSTAVADL AELVSALEKP RAVWVMLPAG APTEDTIQTL SQLLEADDVI IDGGNTFYKD DIRRAQELSE KGLHYVDVGT SGGVWGLERG YCMMIGGDVA AVERLDPLFA SLAPGLGSIE RTRGRTSTDD RAERGYIHSG PAGSGHFVKM IHNGIEYGMM QAFAEGFDLL KQKNSEHLPA EQRFDLNTAD IAEVWRRGSV VSSWLLDLTA DALATDPQLD AFSGSVADSG EGRWTIEAAI EQAVPVPVLS SALFARFRSR QTSSYADKML SAMRFGFGGH KEPK
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