Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3103 |
Symbol | |
ID | 1184760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3490721 |
End bp | 3491083 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637394461 |
Product | transcriptional regulator, putative |
Protein accession | NP_792895 |
Protein GI | 28870276 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000951367 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCCAGAC TTGCCGAGTT TCGAGCAGCA GAGAAAGCCC TTCAAGAGCA GCTTGCACAG CTGGAATCCT TGAAGAATGA CGCCGGATTG AAGAAGGAGA TCGAATTCGA GCAAAAGCTC CAGACCCTGA TGGGCACCTA CGGCAAAAGC CTGCGTGACA TCATCGCTAT CCTTGACCCT TCAAGCTCTA CGTCGCTGGT AGCGCCCGCC GGGCCCAAGC GCCGTCGTGC ACGCGTGGTC AAGGTTTATC AAAACCCGCA CACCGGCGAG CTGATTGAAA CCAAGGGTGG CAACCACCGC GGTCTCAAAG CCTGGAAAGA ACAGTACGGT GTGGACACTG TTGATTCGTG GCTTCGCGCC TGA
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Protein sequence | MSRLAEFRAA EKALQEQLAQ LESLKNDAGL KKEIEFEQKL QTLMGTYGKS LRDIIAILDP SSSTSLVAPA GPKRRRARVV KVYQNPHTGE LIETKGGNHR GLKAWKEQYG VDTVDSWLRA
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