Gene PSPTO_3098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3098 
Symbol 
ID1184755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3480906 
End bp3482834 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content58% 
IMG OID637394456 
Productmethyl-accepting chemotaxis protein 
Protein accessionNP_792890 
Protein GI28870271 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.398555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCGA CATGGCTGGA CAATCTGAAC GTCAGCAAGA AACTGAGTAT CGGCTTCGGG 
ATGATTCTTT TGGGTGTACT GACAGTAACC GCTATTGGTT ACCTCAGCAC AAACCTGCTG
ATCGAGCGCC TGGGCAAGGC GTCCAGGGTC GCGGAGGTGA AAGCCGACGT GCTGAGTATC
AGAATCGCTG CCCAGATTTA CGCGGCCAAG CCTGACGCCG GCAACGCGCA AAGTTACGGC
ACTGCGCTTG ATAGCCTGGG CAAGACGATC GAAGAAGGTC TCAGGATTCT GACCGTCCCG
GCCAACGCCG ATATCCTCAG AAGTATCCGT GACCAGGCGG GCGGGTTGCG ACTGACGTTC
AATCAACTGG TCGACAACAA TCAGAAAATC GATCAGGCCA TGCAGCCGCT CATTGCTATC
TCCGAGCAGG TCAGTGCAAG CTTTGAAACG CTGCTGCAAA AGACATTCGA AGATGCTTCT
CGCTCGCTTG ATCAGAACAG TATTGATCAA GTGAAGATCG CCGGCGATTT GCGCAACGGC
ATGACCAACT TTCGCCTGGT GTTCCGTCGC TATATCAGCA TTCCTACGGC CGACAACAAG
CAGATTACCT TCGATGCTGC AGACGGCCTG ATTGCGCAGG TCACGAGCGC TCGTACCCTG
TTGCCGAACC AGGCCATGCC TGCTGTCGAC ACCGCGCTTG CGGCGTTGCA ACAGTACAAG
TCGCTGATGG TGTCCATTTC GCAGATGATG CAACAGAACG ACCAGATCCG CGACACGCTG
CGTCAACAGT CGCTGGACAT CCTCAAGAGT GCCGATGGCC TGATGGCCGG TCAGGTGGTA
AGTGCCAACA AGGAAAAAGA CAGTGCGGTC ACTCAGTTGC TCACGGTGGC GTTGATCGCA
CTGTTGCTGG GTGTGTTGGC GGCCATCCTG ATCACCCGTC AGATTACCCG TCCGCTCAAC
GCCACTGTGA TCGCAGCACG GCGCATTGCC GACGGTGATC TGACAAACGA CATCAGCACC
ACTCGCCAGG ATGAACTGGG CCTGCTGCAA AACACCATGC AACACATGAC CGTATCGCTG
CGCACGCTGA TTGGCGGTAT CAGCAATGGC GTGACGCAAA TCGCCACGGC AGCCGAAGAG
CTTTCAGCGG TCAGTGAGCA GACCAGCGCT GGCGTGACTC AACAGAAAAT GGAAGTCGAT
CAGGTGGCCA CCGCCATGAA CCAGATGGCC TCTACCGTGC AGGAAGTTGC GCAGAACACT
GAGGACGCCG CGCAGGCTGC CAGACAGGCG AGCGATCGTG CCGCCCACGG CAGCAGCGTG
GTGCAACACG CCACTCGCGA AATCAGCCAG TTGGCCGGTG AAGTCGGGCA GTTGGGGCAG
GCCATGCAGC GTCTGATTCA GGACAGTGAC AAGATCGGCG GGGTGATCGA TGTGATCAAG
GCGGTCGCCG AGCAGACCAA CCTGCTGGCG CTCAACGCGG CTATCGAGGC TGCACGTGCC
GGTGAGCAAG GTCGTGGCTT TGCCGTGGTC GCCGATGAGG TGCGTTCGCT GGCGCAGCGT
ACGCAAAAAT CCACCACTGA AATTGAAGCA TTGATTCAGG CGTTGCAACA CGGCACTGGA
GCCGCGTCGG AGCTGATGGA CGCCAGCCGC CAGCGTACTG AAGGCACCGT GGAACTGGCC
CGCCAGGCTG AGCAATCGCT GGTGGAGATC ACTCGCTCGA TCGTCACCAT CGAACAAATG
AGCCAGCAGA TTTCCGCCGC CGCCGAGGAA CAAAGCGCCG TCACCGATGA AATCAATCGC
AGTGTCATCA GTGTGCGTGA CATCGCCGAT CAGTCCGCCA CCGCGACCGA GCAAAGCGCA
GCGTCCACGG TAGAACTGGC GCGCCTGGGC AGTAACCTGC AAGGCATGGT TGCGCGCTTT
CGGATCTGA
 
Protein sequence
MKSTWLDNLN VSKKLSIGFG MILLGVLTVT AIGYLSTNLL IERLGKASRV AEVKADVLSI 
RIAAQIYAAK PDAGNAQSYG TALDSLGKTI EEGLRILTVP ANADILRSIR DQAGGLRLTF
NQLVDNNQKI DQAMQPLIAI SEQVSASFET LLQKTFEDAS RSLDQNSIDQ VKIAGDLRNG
MTNFRLVFRR YISIPTADNK QITFDAADGL IAQVTSARTL LPNQAMPAVD TALAALQQYK
SLMVSISQMM QQNDQIRDTL RQQSLDILKS ADGLMAGQVV SANKEKDSAV TQLLTVALIA
LLLGVLAAIL ITRQITRPLN ATVIAARRIA DGDLTNDIST TRQDELGLLQ NTMQHMTVSL
RTLIGGISNG VTQIATAAEE LSAVSEQTSA GVTQQKMEVD QVATAMNQMA STVQEVAQNT
EDAAQAARQA SDRAAHGSSV VQHATREISQ LAGEVGQLGQ AMQRLIQDSD KIGGVIDVIK
AVAEQTNLLA LNAAIEAARA GEQGRGFAVV ADEVRSLAQR TQKSTTEIEA LIQALQHGTG
AASELMDASR QRTEGTVELA RQAEQSLVEI TRSIVTIEQM SQQISAAAEE QSAVTDEINR
SVISVRDIAD QSATATEQSA ASTVELARLG SNLQGMVARF RI