Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3098 |
Symbol | |
ID | 1184755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3480906 |
End bp | 3482834 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637394456 |
Product | methyl-accepting chemotaxis protein |
Protein accession | NP_792890 |
Protein GI | 28870271 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.398555 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCGA CATGGCTGGA CAATCTGAAC GTCAGCAAGA AACTGAGTAT CGGCTTCGGG ATGATTCTTT TGGGTGTACT GACAGTAACC GCTATTGGTT ACCTCAGCAC AAACCTGCTG ATCGAGCGCC TGGGCAAGGC GTCCAGGGTC GCGGAGGTGA AAGCCGACGT GCTGAGTATC AGAATCGCTG CCCAGATTTA CGCGGCCAAG CCTGACGCCG GCAACGCGCA AAGTTACGGC ACTGCGCTTG ATAGCCTGGG CAAGACGATC GAAGAAGGTC TCAGGATTCT GACCGTCCCG GCCAACGCCG ATATCCTCAG AAGTATCCGT GACCAGGCGG GCGGGTTGCG ACTGACGTTC AATCAACTGG TCGACAACAA TCAGAAAATC GATCAGGCCA TGCAGCCGCT CATTGCTATC TCCGAGCAGG TCAGTGCAAG CTTTGAAACG CTGCTGCAAA AGACATTCGA AGATGCTTCT CGCTCGCTTG ATCAGAACAG TATTGATCAA GTGAAGATCG CCGGCGATTT GCGCAACGGC ATGACCAACT TTCGCCTGGT GTTCCGTCGC TATATCAGCA TTCCTACGGC CGACAACAAG CAGATTACCT TCGATGCTGC AGACGGCCTG ATTGCGCAGG TCACGAGCGC TCGTACCCTG TTGCCGAACC AGGCCATGCC TGCTGTCGAC ACCGCGCTTG CGGCGTTGCA ACAGTACAAG TCGCTGATGG TGTCCATTTC GCAGATGATG CAACAGAACG ACCAGATCCG CGACACGCTG CGTCAACAGT CGCTGGACAT CCTCAAGAGT GCCGATGGCC TGATGGCCGG TCAGGTGGTA AGTGCCAACA AGGAAAAAGA CAGTGCGGTC ACTCAGTTGC TCACGGTGGC GTTGATCGCA CTGTTGCTGG GTGTGTTGGC GGCCATCCTG ATCACCCGTC AGATTACCCG TCCGCTCAAC GCCACTGTGA TCGCAGCACG GCGCATTGCC GACGGTGATC TGACAAACGA CATCAGCACC ACTCGCCAGG ATGAACTGGG CCTGCTGCAA AACACCATGC AACACATGAC CGTATCGCTG CGCACGCTGA TTGGCGGTAT CAGCAATGGC GTGACGCAAA TCGCCACGGC AGCCGAAGAG CTTTCAGCGG TCAGTGAGCA GACCAGCGCT GGCGTGACTC AACAGAAAAT GGAAGTCGAT CAGGTGGCCA CCGCCATGAA CCAGATGGCC TCTACCGTGC AGGAAGTTGC GCAGAACACT GAGGACGCCG CGCAGGCTGC CAGACAGGCG AGCGATCGTG CCGCCCACGG CAGCAGCGTG GTGCAACACG CCACTCGCGA AATCAGCCAG TTGGCCGGTG AAGTCGGGCA GTTGGGGCAG GCCATGCAGC GTCTGATTCA GGACAGTGAC AAGATCGGCG GGGTGATCGA TGTGATCAAG GCGGTCGCCG AGCAGACCAA CCTGCTGGCG CTCAACGCGG CTATCGAGGC TGCACGTGCC GGTGAGCAAG GTCGTGGCTT TGCCGTGGTC GCCGATGAGG TGCGTTCGCT GGCGCAGCGT ACGCAAAAAT CCACCACTGA AATTGAAGCA TTGATTCAGG CGTTGCAACA CGGCACTGGA GCCGCGTCGG AGCTGATGGA CGCCAGCCGC CAGCGTACTG AAGGCACCGT GGAACTGGCC CGCCAGGCTG AGCAATCGCT GGTGGAGATC ACTCGCTCGA TCGTCACCAT CGAACAAATG AGCCAGCAGA TTTCCGCCGC CGCCGAGGAA CAAAGCGCCG TCACCGATGA AATCAATCGC AGTGTCATCA GTGTGCGTGA CATCGCCGAT CAGTCCGCCA CCGCGACCGA GCAAAGCGCA GCGTCCACGG TAGAACTGGC GCGCCTGGGC AGTAACCTGC AAGGCATGGT TGCGCGCTTT CGGATCTGA
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Protein sequence | MKSTWLDNLN VSKKLSIGFG MILLGVLTVT AIGYLSTNLL IERLGKASRV AEVKADVLSI RIAAQIYAAK PDAGNAQSYG TALDSLGKTI EEGLRILTVP ANADILRSIR DQAGGLRLTF NQLVDNNQKI DQAMQPLIAI SEQVSASFET LLQKTFEDAS RSLDQNSIDQ VKIAGDLRNG MTNFRLVFRR YISIPTADNK QITFDAADGL IAQVTSARTL LPNQAMPAVD TALAALQQYK SLMVSISQMM QQNDQIRDTL RQQSLDILKS ADGLMAGQVV SANKEKDSAV TQLLTVALIA LLLGVLAAIL ITRQITRPLN ATVIAARRIA DGDLTNDIST TRQDELGLLQ NTMQHMTVSL RTLIGGISNG VTQIATAAEE LSAVSEQTSA GVTQQKMEVD QVATAMNQMA STVQEVAQNT EDAAQAARQA SDRAAHGSSV VQHATREISQ LAGEVGQLGQ AMQRLIQDSD KIGGVIDVIK AVAEQTNLLA LNAAIEAARA GEQGRGFAVV ADEVRSLAQR TQKSTTEIEA LIQALQHGTG AASELMDASR QRTEGTVELA RQAEQSLVEI TRSIVTIEQM SQQISAAAEE QSAVTDEINR SVISVRDIAD QSATATEQSA ASTVELARLG SNLQGMVARF RI
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