| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3094 |
|---|
| Symbol | |
|---|
| ID | 1184751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 3477551 |
|---|
| End bp | 3478012 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637394454 |
|---|
| Product | lipoprotein, putative |
|---|
| Protein accession | NP_792888 |
|---|
| Protein GI | 28870269 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.173626 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCAC GTCTTCTGTT ACCTGGCCTG CTATTACTGC TGGCCGGGTG CACTGCCACC
CCCGTTTTGC CGGTGCATAC AACCACCCCG TCCAGCGCAA CCCTGCAGGG CGACAGCCGC
CGCCCAGCAC AAGCGCAGTG GCTGCGCACC GAGTTGTACT TCTCGACCGG GTCGCTGGAC
GATCCGCAGC ATCAAGTGAA TGCGGCGCGC TGGCGCGAGT TCCTCGACAA GGAAGTCACC
CCGCGCTTTC CGGACGGCTT CACCGCATTC GATGCCTACG GCCAGTGGCG CGACAAAGAC
GCTGCCCAGC CAGAGCGGTT GAGTACCAAA GTCATTGTCA TCCTGCACGA GAACACCGCC
ACACATCGCG CAGACATCGA AGCCATCCGC CTGGCCTGGA AACGGGTGAC GGGCGACCTG
TCGGTGTTGC GGCTGTCGCA GCCGGCGGAG ATTTCTTTTT AA
|
|---|
| Protein sequence | MPARLLLPGL LLLLAGCTAT PVLPVHTTTP SSATLQGDSR RPAQAQWLRT ELYFSTGSLD
DPQHQVNAAR WREFLDKEVT PRFPDGFTAF DAYGQWRDKD AAQPERLSTK VIVILHENTA
THRADIEAIR LAWKRVTGDL SVLRLSQPAE ISF
|
|---|
| |