| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3091 |
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| Symbol | |
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| ID | 1184748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3473979 |
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| End bp | 3475625 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637394451 |
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| Product | nickel ABC transporter, ATP-binding protein, putative |
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| Protein accession | NP_792885 |
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| Protein GI | 28870266 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00987515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGACA GCCCGCCCCT GATCGACATC CGTCATCTGA GTGTCGCTTA CCGCTTCGAC
GGCCAGACCA ACCAGGCCGT GCGCAACGTG TCATTCCAGG TGGCCAGCGG CGAAACCGTG
GCGATTGTCG GCGAATCCGG CTCCGGCAAG TCAACCCTGG CCAACGCGAT CCTCGGCCTG
CTACCGGACA ACGCGCGCAT CAACGGCGGC GAACTGCATA TCGATGGTCA CGACCTGAGC
CACGCCTCCG AGCGCGAGAG ACGTCGGGTT CGCGGCAGTG TGATCGGTCT GGTGCCACAA
GACCCGATGG TCAGCCTCAA CCCGACATTG CGCATCGGTC GGCAGATTGC CGAAGCGCTG
ATTCTGGCCA ATGGCCGCCG CTATCCGGCA GTCGATGCCG ATGTGCTGGA ATTGCTCCAG
CAGGTCGGCC TGGACAAGCC CGTGCTGCGC GCCCGACAGT ACCCGCACGA GCTGTCCGGC
GGCATGCGCC AACGTGTGTT GATTGCCATT GCGCTGGCCG GCAACCCGCG CCTGATCATC
GCTGACGAGC CCACCAGCGC GCTGGATGTG ACGGTGCAGC GCAAGATCCT CGATCACCTG
CAACGACTGG TCGCCGAACG GGGCATTTCC CTGCTGATCA TCACCCATGA CCTCGGCGTG
GCAGCCGATC GGGCTGATCG CGTACTGGTG ATGAAAAGTG GCGAGCTGGT CGAACAAGGC
GCGCCGCAAC ACATTCTCAT CAACCCGGCT CATGCCTACA CTCGCGCACT GATTGCCGCA
GCACCGGCTT TCGGCCAGCG CAAAAGCCCG GCAGCACCCC GCGTGGTGTC GAGCAATGAC
ACGCCGCTGT TGACCCTGAG CAACATCGGC AAGACCTATC GCTTGCCTTA CGTCAAAGGC
GAGGATGCCG ATTTTCAGGC GTTGCACGAC GTCAATTTCA AGGTATATCC GGGCCAAACC
CTGGCGATTG TCGGCGAGTC TGGTTCAGGC AAAAGCACTG CGCTGCGCAT TGCCCTGGGC
CTGGAGAAAC CGACCTGCGG GCGAGTGTTG CTTGAAGGAC GTGATGTCAC CGACCTCGGC
TGGCGCGAGT TCAGGCCCTT GCGACGGCGT ATCCAGTTGG TGCAGCAAAA TCCGTTTGCC
GCGCTGGACC CGCACTTTAC GTTATTCGAG AGCATCGTCG AGCCACTGGT CTCATTCGGC
CTGCTGAAAG GCCGGGAACT AGAACAGGCA GCCCGCCGGT TGATCGAGCG AGTGCACCTG
CCAGTGGCTT ACCTGGACCG CCTGCCCCGC GAGCTGTCGG GCGGGCAGCG CCAGCGGGTG
GCGATTGCCC GAGCGCTGGC GCTGAAACCG GATTTGCTGC TGCTTGATGA GCCGGTGTCG
GCGCTCGATG TGTCAGTGCA GGCGCAAATT CTCGACTTGC TGGTAGAGCT GCAAGCCGAA
TCCGGCATTG CCTACGTGCT GGTCTCTCAC GACCTCGCGG TGGTCGCCAG CGTCGCCCAT
CAGGTGCTGG TGCTCAAGCA TGGCAAGACC ATCGAACACG GCCCGGCCAG CGACGTTTTC
GAGCGGCCGG AAGCCGCCTA CACTCAAGAA TTGATTGCTG CGATACCCGG CCGCCGCCTG
GAGCTACAGG CAGCGGCACA GCACTAA
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| Protein sequence | MTDSPPLIDI RHLSVAYRFD GQTNQAVRNV SFQVASGETV AIVGESGSGK STLANAILGL
LPDNARINGG ELHIDGHDLS HASERERRRV RGSVIGLVPQ DPMVSLNPTL RIGRQIAEAL
ILANGRRYPA VDADVLELLQ QVGLDKPVLR ARQYPHELSG GMRQRVLIAI ALAGNPRLII
ADEPTSALDV TVQRKILDHL QRLVAERGIS LLIITHDLGV AADRADRVLV MKSGELVEQG
APQHILINPA HAYTRALIAA APAFGQRKSP AAPRVVSSND TPLLTLSNIG KTYRLPYVKG
EDADFQALHD VNFKVYPGQT LAIVGESGSG KSTALRIALG LEKPTCGRVL LEGRDVTDLG
WREFRPLRRR IQLVQQNPFA ALDPHFTLFE SIVEPLVSFG LLKGRELEQA ARRLIERVHL
PVAYLDRLPR ELSGGQRQRV AIARALALKP DLLLLDEPVS ALDVSVQAQI LDLLVELQAE
SGIAYVLVSH DLAVVASVAH QVLVLKHGKT IEHGPASDVF ERPEAAYTQE LIAAIPGRRL
ELQAAAQH
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