Gene PSPTO_3069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3069 
Symbol 
ID1184726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp3451778 
End bp3452404 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content59% 
IMG OID637394429 
Producttranscriptional regulator, TetR family 
Protein accessionNP_792863 
Protein GI28870244 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0746648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAAA TGGGACGTCC GCGCACGTTT GACCGTGACG TGGCAATTAC TCAGGCAATG 
CACCTGTTCT GGGAGCATGG ATACGATGCG ACATCCCTTA GCCAGCTCAA GGCCAACATT 
GGCGGGGGCA TCACCGCGCC CAGCTTTTAC GCCGCTTTCG GTTCAAAACA GGCGCTGTTC 
ACTGAGGTCA TGGAGCGCTA CCTCACTACC CACGGCCGAG TCACCGACAG CCTGTTTGAT 
ACGACCCTGC CGCCTAGAGA GGCGATTGAA CTTACCCTTC GCCGGTCCGC GAAAATGCAA 
TGTGAGCCCG ATCACCCCAA GGGATGTCTG GTATCGTTAG GCCTGATGAG CGCTTGCTCG 
GAGGAAAGCA AGGCCATCTC CGCGCCTCTG GCACAGGCGA GGAATCTGAA CCGTGCAGGT 
CTGATAGCGT GCATCGACCG CGCCATTGCC TCAGGCGAAT TGCCTGCTAC GGTGATACCG 
GAGACGTTCG CCGCCGTGTT CGACAGCTTT ATGCTCGGTT TGTCGACACT GGCACGCGAC 
GGTGTCGCGC ATGCCACGCT GGATAGCGCA GTGACTCAGG TGATGGGGCT GTGGGACAGC 
CTGCGTGTCG TTGCCGACGA TCAGTGA
 
Protein sequence
MAQMGRPRTF DRDVAITQAM HLFWEHGYDA TSLSQLKANI GGGITAPSFY AAFGSKQALF 
TEVMERYLTT HGRVTDSLFD TTLPPREAIE LTLRRSAKMQ CEPDHPKGCL VSLGLMSACS 
EESKAISAPL AQARNLNRAG LIACIDRAIA SGELPATVIP ETFAAVFDSF MLGLSTLARD 
GVAHATLDSA VTQVMGLWDS LRVVADDQ