Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3062 |
Symbol | |
ID | 1184719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3443659 |
End bp | 3444909 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637394422 |
Product | iron-sulfur cluster-binding protein, rieske family |
Protein accession | NP_792856 |
Protein GI | 28870237 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.476881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATACAA GATCAGACGT TTCGAAGCTT ATTGCACAAC GTAAACCCCG TCATGCGTTA CCAAGAGCGT TGTACAGCAA CCTGGCTGTC TATCAGCAGG ATCTGCAGCA GCTCTGGCAC AAGGACTGGA TTTTCGCTGG CCATACCTTT GAACTGGAAA AGTCAGGTCA GTATCTGTCC CTGCAAATTG GCGATTACCC GGTCGCTGTC GTTCGCGGCG CAGACGGTCA GGTTCGTGCG TTTCATAACT CCTGCCGGCA TCGAGGCTCG AAGGTCTGCC CCGAGGCCAA AGGCAAGGTC GCCAAGCTGG TATGCCCTTA TCACAAGTGG ACGTTCGAGC TCGATGGTCG CCTGCTGTTT GCTGGCAACA TGGGTGATGA CTTCGATAAA TCCCAGTACA ACCTGAAACC GGTGCACTGC GAGATCGTCA ATACCTACAT CTATGTCTGT GTGGCAGAGG CCGCTCCGGA CTTTTCCGCG TTCCGCGAAG CCGTTACCCC CTTCCTGATG CCGCACAATC TGGAAGACTG CAAGGTTGCC TTCGAATCCA ACCTGATCGA AAAAGGCAAC TGGAAGCTGG TCTTCGAGAA CAACCGCGAG TGCTATCACT GCGACGGCAC CCACCCTGAA CTGATGAACT CATTCGTCGA GAACCTGTCG GTGGCAGGCG TCGGTGGCAG CGATGACCCC CAATTGACTG CGCACTGGGA TCGCTGCGAA GCGGCGGGCC TGCCTAGCCG GTTGGTCATG GACAACGACG GGCGCTTCCG CATCACTCGC ATCCCGCTGT CCTCCGGGGC CGTCAGCTAC ACAATGGATG GCAAGCCCGC AGTCGCTGTC AGGCTGGATG CCAGCGGCGA GGCCGACATT GGCGCCCTTC TGTATTTCAA CTACCCGTCT ACCTGGAACC ATTTCCTGGG TGATCATGCC CTGAGTTTCC GGGTACTGCC ATTGGGGCCT AACGAGACGC TGGTGACCAC CAAGTGGATC GTCAAGAAAA CGGCCGTGGA AGGCTTGGAC TACGACCTCG ACCGGCTTAC CAAAGTCTGG CTCGCAACCA ATGATCAAGA CCGCACCCTG GTCGAAGGCG CACAAGTGGG GGTCAACTCT CCTGCTTATG AGCCGGGTCC TTTCTCTTCC AAGGCTGAAA ATGGTGTTTG CCAGTTTGAT GACTGGTATT GCGAGATCAT GCTCGACCGG CTGGGAGACG ACCGTGCTCA AGCCAGTATC AAATTGAAGT CGGTGGGATA A
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Protein sequence | MNTRSDVSKL IAQRKPRHAL PRALYSNLAV YQQDLQQLWH KDWIFAGHTF ELEKSGQYLS LQIGDYPVAV VRGADGQVRA FHNSCRHRGS KVCPEAKGKV AKLVCPYHKW TFELDGRLLF AGNMGDDFDK SQYNLKPVHC EIVNTYIYVC VAEAAPDFSA FREAVTPFLM PHNLEDCKVA FESNLIEKGN WKLVFENNRE CYHCDGTHPE LMNSFVENLS VAGVGGSDDP QLTAHWDRCE AAGLPSRLVM DNDGRFRITR IPLSSGAVSY TMDGKPAVAV RLDASGEADI GALLYFNYPS TWNHFLGDHA LSFRVLPLGP NETLVTTKWI VKKTAVEGLD YDLDRLTKVW LATNDQDRTL VEGAQVGVNS PAYEPGPFSS KAENGVCQFD DWYCEIMLDR LGDDRAQASI KLKSVG
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