Gene PSPTO_3025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3025 
Symbol 
ID1184682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3401126 
End bp3401488 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content55% 
IMG OID637394386 
ProductDNA-binding protein, putative 
Protein accessionNP_792820 
Protein GI28870201 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.111076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGGAA TTGGTTGCCG GCTACGAGAA GAACGAGAAC GTCTGGGCAT GTCCCAGCGA 
ACTTTCGGTG AAATAGGAGG CGTCGAAGCT AACGCTCAGG GAAAGTATGA AAATGGTGAC
CGTGCCCCCA AGGCCGATTA TCTGGCTGCT GTCGCGGCCA AGGGTGTGGA TGTGCTGTAC
GTGCTGACCG GCAAACGCAC ACCGGTGCCG ATCGACAATC TCAGCGTCAT CGAGGAAACG
ATTCTGGGCA ACTACCGGGT ATTGGAGAAG GAAGATCAGG ACGCTATCAG GCGCTTGACC
ACTACTATCG CCGAACTTTC TGCACCCTTT GTCGGTGTGG AAAAGCTTCC TTCGGGTCAC
TGA
 
Protein sequence
MNGIGCRLRE ERERLGMSQR TFGEIGGVEA NAQGKYENGD RAPKADYLAA VAAKGVDVLY 
VLTGKRTPVP IDNLSVIEET ILGNYRVLEK EDQDAIRRLT TTIAELSAPF VGVEKLPSGH