Gene PSPTO_3022 details

Gene Information

• Locus tag: PSPTO_3022
• Symbol: pgsA
• ID: 1184679
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 3397895
• End bp: 3398461
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637394383
• Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
• Protein accession: NP_792817
• Protein GI: 28870198
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0558] Phosphatidylglycerophosphate synthase
• TIGRFAM ID: [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.637177
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCGATGA ATATCCCTAA TCTGATCACC GTACTACGCG TTTTACTGAT TCCGATCTTC 
ATTTTGCTGT TCTATATGCC TTATCACTGG AGCTACATGG CAGCCAGTGC AGTCTTTGCG 
TTCGCTGCGG CGACCGACTG GCTCGACGGG TATTTGGCTC GCCGTCTTGA GCAAAGCACG 
CCATTCGGTG CGTTTCTTGA TCCGGTAGCA GACAAACTGA TGGTGGCCGT GGCCCTGGTG 
CTGCTGGTTC AGGCGCACGC CAACCTGTGG CTGACCCTGC CGGCAGCGGT GATCATCGGC 
CGTGAAATCG TGATTTCCGC GCTCCGCGAA TGGATGGCGG AAATAGGCGC GCGTGCACAA 
GTCGCCGTTT CCAACATGGG CAAATGGAAA ACCGCCGCGC AAATGCTGGC GCTGGTCATT 
CTGCTCGGCA ACCCGCCGGC AGTCACCTTC TGGGTGATTT TCGGTTACGC ATTGCTGCTC 
GTCGCAGCGG GGCTGACCCT GTGGTCGATG GTGCAATACC TCAGAGCCGC ATGGCCGCAT 
CTCAAGACCA CAGCAGAAAA AAAATAA 

 

Protein sequence

MPMNIPNLIT VLRVLLIPIF ILLFYMPYHW SYMAASAVFA FAAATDWLDG YLARRLEQST 
PFGAFLDPVA DKLMVAVALV LLVQAHANLW LTLPAAVIIG REIVISALRE WMAEIGARAQ 
VAVSNMGKWK TAAQMLALVI LLGNPPAVTF WVIFGYALLL VAAGLTLWSM VQYLRAAWPH 
LKTTAEKK