| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2996 |
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| Symbol | |
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| ID | 1184652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3368584 |
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| End bp | 3369588 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394358 |
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| Product | ribose ABC transporter, periplasmic ribose-binding protein, putative |
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| Protein accession | NP_792793 |
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| Protein GI | 28870174 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.27383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGATG CCGTTTCTAC TGCCAAACCA ACCCGCCTGC ACGCAGTCTG GCGCACACTC
GCGCTCACCC TGTTTGCTGG CAGTCTAGCC GCAAGCGCTC AGGCCGATGA CAGCGACGTC
CCTTCACTGG CGGGCAAACG CATCGCTATC AGCATGACCG GTACCAGTCA CTACTTCGAT
ATCAAGGCAT TCCAGGCCCA GGTCGATGAG GTCAAGCGTC TGGGCGGCAC GCCGATTACG
CTCGACGCTG GGCGCAACGA CAAGAATCTG GTCAACCAAT TGCAGACCGT CGTCACGCAA
AAACCGGATG CGGTGATCCA GACCCTGGGC ACGCTCAGCG TTATCGACCC GTGGCTCAAG
CGCATCAGCA AGGCCAACAT TCCGCTGTTC ACGATTGATG CGCCGTCGCA GTACAGCCTC
AACAACACCA CCTCTGACAA TGTCGCGACC GGCAAGGCGC TGGCCGGGCA GTTGATCAAG
GATGCCGGCG GCAAGGGCAA TATTCTGGTG TTCAACGGTT TTTATGGCGT GCCGGTCTGC
GCCATTCGTT ATGACCAGCT CAAGCTGGCG CTCAAGGATC ACCCGGAGCT GAAAATCATC
GAGCCCGAGC TGCGAGACGT GATTCCCAAT ACTGTTCAGG ACGCCTATTC GCAGGTGTCT
GCGTTGCTCA ACAAGTACCC TAAAGGCAGT GTTTCAGCGA TCTGGTCGGC CTGGGATATT
CCTCAACTGG GTGCCAGCAA GGCGCTGATC GACGCTGGTC GTACCGAAAT CAAGACCTAT
GGCGTGGACG GCACGCCGGA AGTGCTGGAA CTGATGCGCC GTGACACCTC ACCGGTCGGT
GCCGTGGTGG CGCAACAGCC CGCGCTGATC GGCAAGACCG CCGTGCAGAA CGTTGCCCGC
TATCTGGCCG GACAACGCGA TCTGCCCAAG GAAACCCAGG TGCCGACGCT GCTCACCACG
GCGGCCAATC TGGCCGACGT GCAAAAGCTC AGGGGCGATA ACTGA
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| Protein sequence | MPDAVSTAKP TRLHAVWRTL ALTLFAGSLA ASAQADDSDV PSLAGKRIAI SMTGTSHYFD
IKAFQAQVDE VKRLGGTPIT LDAGRNDKNL VNQLQTVVTQ KPDAVIQTLG TLSVIDPWLK
RISKANIPLF TIDAPSQYSL NNTTSDNVAT GKALAGQLIK DAGGKGNILV FNGFYGVPVC
AIRYDQLKLA LKDHPELKII EPELRDVIPN TVQDAYSQVS ALLNKYPKGS VSAIWSAWDI
PQLGASKALI DAGRTEIKTY GVDGTPEVLE LMRRDTSPVG AVVAQQPALI GKTAVQNVAR
YLAGQRDLPK ETQVPTLLTT AANLADVQKL RGDN
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