Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2891 |
Symbol | |
ID | 1184545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3251661 |
End bp | 3253055 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637394252 |
Product | UDP-glucose 6-dehydrogenase |
Protein accession | NP_792689 |
Protein GI | 28870070 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0166748 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATCA GCGTTTTCGG TAGCGGATAC GTAGGCCTGG TACAAGCAAC CGTACTTGCC GAAGTCGGCC ACGACGTTGT CTGCATGGAC ATTGATCGAG CCAAAATCGA CCAGCTGCGC CTGGGTCAGG TGCATATTTA CGAACCGGGG CTGGCCAACC TGGTGCGTGA AAACCTCGAT CACAAACGCT TGCTCTTCAC CACTGACGAG CAACTGGCGG TAGAGCATGC CGATGTGCTG TTCATTGCCG TAGGGACACC CTCCAGAGAG GACGGATCGG CTGATCTGAG CGGCTTTTTT GCGGTGGGTG AATCCATCGC TCGACATCGC TGTGAGCCGC TGATCATCGT CGAGAAGTCC ACCGTGCCGG TCGGCAGTGG TGACGCCTTG CGGGGGCATA TCGACAAGGC GCTGCGTCAG GCTGGCCGGC TGTTGCAGTT CGATGTGGTG TCCAACCCGG AGTTTCTCAA GGAAGGGTCG GCCGTCAACG ATTGCCGACG CCCGGACCGC ATCGTCATCG GCTGTGACAA TGAAGCGGTG CGCAAAGTCA TGCGCGAGCT GTATGCCCCC TTCAACCGCA ACCATGACCG GATCATGTTC ATGGACCTGC GCAGCGCCGA ACTGACCAAG TACGCTGCAA ACTGCATGCT GGCAACCAAG ATCAGCTTCA TCAACCAGAT CGCCGAACTG GCCGAGCACC TCGGCGCGGA CGTCGAGTCT GTGCGTTTGG GCATCGGGGC CGACTCACGC ATCGGTTACG ACTTCATTTA TCCCGGTTGC GGTTATGGCG GTTCGTGCTT TGGCAAGGAC ATCCGCGCGT TGATCCACAG CGCCAAAGAG GCCAACTGCT CGAATGATCT GCTGTCGGTG GTCGAGGCTA TCAACGAGCG GCAAAAGAAC AAACTGTTTG AAAGGGTCAA CGCGTTCTAC CAAGGCGACC TGCGGGGCAA GACTTTTGCG TTGTGGGGGC TGGCGTTCAA ACCCAACACC GACGATATGC GCGATGCGCC AAGCCGGGTG CTCATGGAAG CACTCTGGGA CGCTGGCGCG ACCATTCGGG CATTTGACCC CGAAGCCATG CAGGAAACCC AGCGCATCTA CGGTCATCGC AAGGACCTGG TTCTGATGGG CACACCAGAA TCGACGCTCA ACGACGCCGA TGCACTGATC ATCTGCACCG AATGGCAGCA ATTCAAGGCG CCAGACTTCG AGCTGATCCA GCAGCGGCTG GGCGCGCCGG TGATTTTCGA TGGGCGTAAT CTGTATGACA CCGAACGGCT GGCAAAACAC GGCTTCCACT ACTTCCCGAT CGGGCGTGGT GAGTCCTGCG ACCTGCCGAT CCCGCAGAAA CAATGGATGC CTTACAAGCC GCAGGTTAGC AGCCAGGTCG TATAG
|
Protein sequence | MKISVFGSGY VGLVQATVLA EVGHDVVCMD IDRAKIDQLR LGQVHIYEPG LANLVRENLD HKRLLFTTDE QLAVEHADVL FIAVGTPSRE DGSADLSGFF AVGESIARHR CEPLIIVEKS TVPVGSGDAL RGHIDKALRQ AGRLLQFDVV SNPEFLKEGS AVNDCRRPDR IVIGCDNEAV RKVMRELYAP FNRNHDRIMF MDLRSAELTK YAANCMLATK ISFINQIAEL AEHLGADVES VRLGIGADSR IGYDFIYPGC GYGGSCFGKD IRALIHSAKE ANCSNDLLSV VEAINERQKN KLFERVNAFY QGDLRGKTFA LWGLAFKPNT DDMRDAPSRV LMEALWDAGA TIRAFDPEAM QETQRIYGHR KDLVLMGTPE STLNDADALI ICTEWQQFKA PDFELIQQRL GAPVIFDGRN LYDTERLAKH GFHYFPIGRG ESCDLPIPQK QWMPYKPQVS SQVV
|
| |