| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2867 |
|---|
| Symbol | |
|---|
| ID | 1184521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 3225935 |
|---|
| End bp | 3226375 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637394231 |
|---|
| Product | TspO/MBR family protein |
|---|
| Protein accession | NP_792668 |
|---|
| Protein GI | 28870049 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0727696 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTCT TCATCTTCCT TCTAGCCTGC TCCGCCGCCG CCGCAACCGG CATCATCTTC
AAACCGGGCG CATGGTACGA ATCCCTTCAA AAACCTGCCT TCACCCCACC AAACTGGGCA
TTTCCGGTGG CGTGGACCAC GATCTATCTG CTCTTGGCCT GGGCAGGATA TCGTCTCACC
CTCCTCCCCG GCAGCCAGAC CGTGCTGGCG CTATGGGCCG CTCAAATTGC ACTGAACACC
TTATGGACCC CGGTATTCTT TGGCGCAAAC CGCATCGCCG CCGCGATGGT GATTCTTGCC
CTGCTGTGGA TCGTTGTCGC CACAATGATC GTGATGGCAT TGCAGCTGGA CATCATTACA
GGTCTGATTT TGTTTCCCTA TCTGGTGTGG CTCTCGGTGG CTGCGGCGCT GAACTTTTCT
ATTCTGCGCC ACAACCGATA A
|
|---|
| Protein sequence | MTFFIFLLAC SAAAATGIIF KPGAWYESLQ KPAFTPPNWA FPVAWTTIYL LLAWAGYRLT
LLPGSQTVLA LWAAQIALNT LWTPVFFGAN RIAAAMVILA LLWIVVATMI VMALQLDIIT
GLILFPYLVW LSVAAALNFS ILRHNR
|
|---|
| |