Gene PSPTO_2820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2820 
Symbol 
ID1184474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3144448 
End bp3145563 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content64% 
IMG OID637394187 
Producthypothetical protein 
Protein accessionNP_792624 
Protein GI28870005 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000426889 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGATTC GTCAGGCCGG CCCTGCGGAC AACGCGCAGC TCCTCGACTT TCAACAGCGT 
CACGCCATGC GCGGCAGCAT GCCGCTGCGC TTTGATCGCA GCCCGGATTA CTTTGCCCTG
CATCACTGCC ATGCCGCCGA TCACCGCACC TGGATCGCCC AAAGCCCGGA AGGCGAGCTG
CGCGGCTCGG CCAGTCTGGT GGTACGCGAC GGCTACCTGC AGGGTAGCGC TGAGCCGATT
GCCTATCTGG GCGATTTGCG GCTGATGCCC GACCGCAGGC TGTCGCGCTC ATGGATGGCA
GAGGTTCAGA CGCGACTCGC CGATCTGTCC CTGCAAACCG GCGCGCAGCA TGCCTATTGC
TGCATCATTC GTGACAACCC GCTGGCCATT CAGTCGCTGC TGGGACGGCG GCGGGCAAAC
CCGCTGAAAC TTGCCCACTG GCGTGGCTAC AGCAATGTGT CGGTGTATGG CCAGCGTGGC
TTGAGCAGTG CACCGCGCAC GCACGCCGGA GTGCGAGTGG TGCGCGCCGA GCCGCGGCAT
CTGGACGCGC TCAGGGCGTT TCTCGACAGT GAGTCGTCCC GGCAATCGTT CGGTTGCGTG
TTCAGCGAAA CGGAATTCGA ACGCAGGATC AGCCACTGGC CGGATTTTGC CATTGGCTCG
TTTCTGCTGG CGGTGGACGA GCGCGAGAAC CTGCTCGGCT GTGTTGCGCC CTGGGATGCC
GGAAAGATAA AACGGATCGT GGTCGAGCAA ATGCCCGTGG CCCAGCAGTT GCTGCGCATG
GGCTACAACG CGGTCGCGCC GCTGGCGGGT CGGCCGGGCA TTGCCTCGCC GGGTAACCCC
CTGCGGGACA TCTACCTGAC CCATCTACAG GTTCGGCAGC GCGATCCCGA GGTATTTGCC
GCCTTGCTGG ACGTTGCCTG GGCGCAGGTG CGCAAAGACT ATTCGCTGAT GCAGTTATGC
CTGTATGACC AGGATCCGCT GTGGCTGGCA ATGCGCCGTT ACCGAAGCGT GTCCCTGCCG
ATGGACCTTT ACACCGCGCC CTGTGGCAGC AATACCCCGG TGTTTACCGA GACTTGTGCG
GCGGGTGTTC CGGGGTTCGA GATCTACCTG GTGTAA
 
Protein sequence
MLIRQAGPAD NAQLLDFQQR HAMRGSMPLR FDRSPDYFAL HHCHAADHRT WIAQSPEGEL 
RGSASLVVRD GYLQGSAEPI AYLGDLRLMP DRRLSRSWMA EVQTRLADLS LQTGAQHAYC
CIIRDNPLAI QSLLGRRRAN PLKLAHWRGY SNVSVYGQRG LSSAPRTHAG VRVVRAEPRH
LDALRAFLDS ESSRQSFGCV FSETEFERRI SHWPDFAIGS FLLAVDEREN LLGCVAPWDA
GKIKRIVVEQ MPVAQQLLRM GYNAVAPLAG RPGIASPGNP LRDIYLTHLQ VRQRDPEVFA
ALLDVAWAQV RKDYSLMQLC LYDQDPLWLA MRRYRSVSLP MDLYTAPCGS NTPVFTETCA
AGVPGFEIYL V