Gene PSPTO_2792 details

Gene Information

• Locus tag: PSPTO_2792
• Symbol: lexA-1
• ID: 1184446
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 3110567
• End bp: 3111175
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637394160
• Product: LexA repressor
• Protein accession: NP_792597
• Protein GI: 28869978
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases)
• TIGRFAM ID: [TIGR00498] SOS regulatory protein LexA

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.147289
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCACAT TATCTCCCCG TCGTAGCGCA ATCCTTACCT TCATCCGCGA TCGCATCGCG 
CAGCAAGGGC AATCGCCGAG CCTGGCGGAA ATTTCCGAGG CCTTCGGCTT TGCTTCGCGC 
AGCGTGGCGC GCAAACACAT TGTGGCCCTG ACCGAAGCCG GCCTGATCGA AGTCGTGGCG 
CATCAGGCAC GCGGCATTCG CCTGCTGAAC AGTGAACCGC GCCCCGAACT GCTGGAAATA 
CCCGTGCTGG GGCGCGTGGC GGCAGGCGCA CCCATCGGGC CGGATCTGGA CATACACACT 
ACCTTGCATC TGGATCGCAG CACCTTTACC CGTGTGCCGG ACTACCTGCT GCGCGTGCAG 
GGCGACTCGA TGATCGAAGA CGGTATTCTC GATGGCGACC TGGTGGGCGT GCACCGCAAC 
CCGCAGGCCA GTGACGGGCA GATCGTCGTC GCCCGTCTGG AGGGCGAGGT CACCATCAAG 
CGCTTGCAGC ACCGGGGCGA TCAGTTGCAC CTGCTGCCGC GCAACCCGGC GTATCAACCG 
ATCATCGTCA CGCCCGATCA GGACTTCGCC ATCGAAGGCG TGTTCTGCGG GCTGGTCCGG 
CGCGAATGA 

 

Protein sequence

MSTLSPRRSA ILTFIRDRIA QQGQSPSLAE ISEAFGFASR SVARKHIVAL TEAGLIEVVA 
HQARGIRLLN SEPRPELLEI PVLGRVAAGA PIGPDLDIHT TLHLDRSTFT RVPDYLLRVQ 
GDSMIEDGIL DGDLVGVHRN PQASDGQIVV ARLEGEVTIK RLQHRGDQLH LLPRNPAYQP 
IIVTPDQDFA IEGVFCGLVR RE