Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2764 |
Symbol | |
ID | 1184418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3084908 |
End bp | 3086140 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637394132 |
Product | transporter, putative |
Protein accession | NP_792569 |
Protein GI | 28869950 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0479681 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAGGC ACTCCAACCG CCTGCCAGCG AAGAGTCCAA TGCCTGCCGC GCAATCCGGT TCCACGACGA TTACCCTGCA AATCGTCTCC ATCGTCTTCT ACACGTTCAT CGCCTTCCTG TGCATCGGTC TGCCTATCGC GGTACTGCCC GGTTACGTCC ATGATCAACT GGGTTTCAGC CCGCTGATTG CCGGTCTGGC CATCGCTTCG CAGTACCTCG CCACCCTGCT CAGCCGGCCG TTTGCCGGCC GGGCGACAGA CTCGTTGGGC AGCAAGCGCT CCATCGTGTT CGGGCTGTGG GGCATCGGTA TCAGCGGTGT TATGACACTG CTGGCAACTC TGCTTGAGGA TTTTGCGACG CTCAGCCTGT CGATTCTGAT CGTGGCACGG CTGTTTCTCG GTGTGTCTCA AGGGCTGATC GGGGTTGGTA CCATCAGTTG GTGCATCGGC AAGGTCGGTG CAGAGCACAC GGCCCGCTCG ATCTCCTGGA ACGGCATTGC CTCCTATGGC GCGATCGCCA TTGGTGCACC GCTGGGGGTG GTGGTCATCG ACGCGGTTGG CTTCAACAGC CTGGGTGTGG CCCTGATAGT GATGGCAGGC CTGGCGCTGG TGCTGATCCG CAACAAGCCT TCGGTACCCA TCATTGCAGG CGAGCGCCTC CCCTACTGGT CGGTGTTTGG CCGTATAGCA CCTTACGGGC TGGGCCTGAC CTTGTCGTCA ATCGGCTATG GCACGCTGAC CACTTTTATT ACGCTGTTTT ACCTGAGCCG TGGCTGGCAA GGTGCGGCGT ATTGCCTGAG CATGTTTGGC GTGTGTTTTA TCCTCGCCCG CCTGCTGTTC ATCGGTGCCA TCAATCGGCT TGGTGGCTAC AACGCCGCCA TCCTGTGCAT GGCCGTTGAG ATCTGCGGTC TGGTCATGCT CTGGCTTGCG CCCAACACCG GTTTCGCACT GGCAGGGGCC GGCCTGACCG GTGTCGGGCT GTCGCTGGTG TACCCGGCGC TTGGCGTGGA AGCGATCAAA CGCGTGCCGA CGCCCAGCCG TGGCGCAGGC CTGAGTGCCT ATGCCGTGTT CTTCGACCTG GCCCTGGCCA TCGCAGGCCC GGTGATGGGC GCGATTGCCC TGGGGCAAGG TTATGACTGG ATCTTTTTCT ATGCGGCAGT GCTGTCGGTA TGCGCGCTAG GCCTGACGCT CTGGTTGTCA CGCCGGGCCA GTCAGCAGGC GCAAAGCGTT TGA
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Protein sequence | MMRHSNRLPA KSPMPAAQSG STTITLQIVS IVFYTFIAFL CIGLPIAVLP GYVHDQLGFS PLIAGLAIAS QYLATLLSRP FAGRATDSLG SKRSIVFGLW GIGISGVMTL LATLLEDFAT LSLSILIVAR LFLGVSQGLI GVGTISWCIG KVGAEHTARS ISWNGIASYG AIAIGAPLGV VVIDAVGFNS LGVALIVMAG LALVLIRNKP SVPIIAGERL PYWSVFGRIA PYGLGLTLSS IGYGTLTTFI TLFYLSRGWQ GAAYCLSMFG VCFILARLLF IGAINRLGGY NAAILCMAVE ICGLVMLWLA PNTGFALAGA GLTGVGLSLV YPALGVEAIK RVPTPSRGAG LSAYAVFFDL ALAIAGPVMG AIALGQGYDW IFFYAAVLSV CALGLTLWLS RRASQQAQSV
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