| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2739 |
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| Symbol | |
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| ID | 1184393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3043594 |
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| End bp | 3044937 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394108 |
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| Product | acyl-CoA dehydrogenase, putative |
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| Protein accession | NP_792545 |
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| Protein GI | 28869926 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGGGGA GCCCAGGCTC CCCTTCGTGC TTTCCGACGT TTGCTTTTGC CTCCTCAACT
TCCCCCGCCC CTGCGCAAAC GCGCCTGATT GACAGCACAC ACGTGCAGGT TTACGTTAAC
GTAAAGGTCA TAGCCAATCC GCACAGAACC ATCTCCAAGA ATAAAACAGG AACGCTACCC
ATGAGTTACC CCAGCCTGAA CTTCGCCCTG GGCGAAACCA TCGACATGCT GCGCGACCAG
TTGCAGTCTT TTGTTGCCGC AGAAATTTCC CCGCGCGCCG CCCAGATCGA CAAGGACAAC
CTGTTTCCTG CCGACATGTG GCGCAAGTTC GGCGAGATGG GCGTGCTGGG CATTACCGTC
AGCGAAGAGT ACGGCGGCGC GGGCCTGGGG TATTTGGCGC ATGTTGTAGC CATGGAAGAA
ATCAGCCGTG GCTCGGCCTC GGTGGCATTG TCCTATGGCG CGCACTCGAA CCTCTGCGTC
AACCAGATCA ACCGCAACGG CAATCCGGCG CAGAAAGCCC GCTATTTACC GAAACTGATC
AGCGGCGAGC ACGTCGGCGC ACTGGCCATG AGCGAACCCA ATGCCGGCTC GGACGTGGTG
TCGATGAAGC TGCGCGCCGA CAAGCGTGGC GATCGCTATG TGCTCAATGG CAGCAAGACC
TGGATCACCA ACGGGCCGGA TGCCGACACC TACGTGATCT ACGCCAAGAC TGATCTGGAA
AAGGCCGCAC ATGGCATCAG CGCGTTCATC GTCGAGCGCG ACTGGAAAGG CTTTTCTCGC
GGCAGCAAGT TCGACAAGCT CGGCATGCGC GGCTCCAACA CCTGCGAGCT GTTTTTCGAC
GATGTCCAAG TGCCTGAGGA AAACCTGCTG GGCGCACTCG ACGGCGGCGT CAGAGTGCTG
ATGAGCGGCC TGGATTATGA ACGCGTCGTG CTTTCTGGCG GGCCGACCGG GATCATGCAG
GCCTGCATGG ACGTGGTGGT CCCCTACATT CACGACCGCA AGCAATTCGG CCAGAGCATC
GGCGAATTCC AGCTGATTCA GGGCAAGATT GCCGACATGT ACACCCACCT CAACGCCAGC
CGGGCGTACT TGTATGCCGT GGCCCAGGCC TGTGATCGTG GCGAGACCAC GCGCAAGGAC
GCCGCCGGGG TGATTCTCTA CAGCGCAGAG CGCGCCACCC AGATGGCACT GGACGCCATC
CAGATTCTCG GCGGCAATGG TTACATCAAC GAGTTTCCGG CCGGGCGACT GCTGCGCGAC
GCCAAGCTCT ACGAGATCGG CGCCGGCACC AGCGAGATCC GACGCATGCT CATCGGTCGT
GAACTGTTCA ACGAAACCCG TTGA
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| Protein sequence | MKGSPGSPSC FPTFAFASST SPAPAQTRLI DSTHVQVYVN VKVIANPHRT ISKNKTGTLP
MSYPSLNFAL GETIDMLRDQ LQSFVAAEIS PRAAQIDKDN LFPADMWRKF GEMGVLGITV
SEEYGGAGLG YLAHVVAMEE ISRGSASVAL SYGAHSNLCV NQINRNGNPA QKARYLPKLI
SGEHVGALAM SEPNAGSDVV SMKLRADKRG DRYVLNGSKT WITNGPDADT YVIYAKTDLE
KAAHGISAFI VERDWKGFSR GSKFDKLGMR GSNTCELFFD DVQVPEENLL GALDGGVRVL
MSGLDYERVV LSGGPTGIMQ ACMDVVVPYI HDRKQFGQSI GEFQLIQGKI ADMYTHLNAS
RAYLYAVAQA CDRGETTRKD AAGVILYSAE RATQMALDAI QILGGNGYIN EFPAGRLLRD
AKLYEIGAGT SEIRRMLIGR ELFNETR
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