Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2706 |
Symbol | |
ID | 1184360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3001788 |
End bp | 3002720 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637394075 |
Product | mannitol ABC transporter, permease protein |
Protein accession | NP_792512 |
Protein GI | 28869893 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.012271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACCT CAGCCTCCCC TGAACGCTCG GACCTGTCCG GCGAACAGCC ACCGCTCAAA AGTCGTCGAT TCAAACCTGG CTGGTTTCTG GTCAGCCCCT CTGTGCTGCT TTTGCTGGTA TGGATGATCG TACCGCTGGG CATGACCATT TATTTCTCGC TGATCCGCTA CAACCTGCTG TCACCCGGCG AAAACGAATT CGTCGGGCTG GAAAACTTCC AGTATTTCGT GACCGACAGC GGCTTTCTTC CCGGTGCCGG CAATACCTTG TTGCTGGTCG GCAGTGTGCT GGCGATCAGT GTGATCCTCG GCGTACTGAT TTCGGCGCTG CTCGAAGCCA GCGAGTTCTT CGGACGGGGC ATCGTTCGCG TACTGCTGAT CTCGCCCTTC TTCATCATGC CCACGGTCAG TGCGCTGATC TGGAAAAACC TGATTTTCCA CCCGGTCTCC GGCGTGCTCG CGGCGGTGTG GAAATTCTTC GGTGCGCAGC CCATCGACTG GTTTGCCCAT TACCCGATGC TGTCGATCAT CATCATTGTG TCCTGGCAGT GGCTGCCGTT CGCCATCCTG ATTCTGATGA CCGCCATGCA GTCGCTTGAC CAGGAACAAA AGGAGGCCGC GCGCCTGGAT GGAGCCGGCC CCATCGCGAT CTTCTGGCAC CTGACCCTGC CGCACCTGGC GCGGCCGATA GCCGTGGTGG TCATGATCGA AACGATCTTC CTGCTCTCGG TGTTCGCTGA AATCTTCACC ACCACCAACG GTGGCCCTGG CTTTGCCTCG ACCATCCTGG CGTATCTGAT CTACATCCAG GCGCTGCTGC AGTTCGACGT CGGCATGGCC TCGGCGGGCG GGCTGATTGC CGTTGTCATC GCCAACATCG CGGCGATCAT CCTGATTCGG ATGATCGGCA AAAACCTCAC CGACAAGTCA TGA
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Protein sequence | MNTSASPERS DLSGEQPPLK SRRFKPGWFL VSPSVLLLLV WMIVPLGMTI YFSLIRYNLL SPGENEFVGL ENFQYFVTDS GFLPGAGNTL LLVGSVLAIS VILGVLISAL LEASEFFGRG IVRVLLISPF FIMPTVSALI WKNLIFHPVS GVLAAVWKFF GAQPIDWFAH YPMLSIIIIV SWQWLPFAIL ILMTAMQSLD QEQKEAARLD GAGPIAIFWH LTLPHLARPI AVVVMIETIF LLSVFAEIFT TTNGGPGFAS TILAYLIYIQ ALLQFDVGMA SAGGLIAVVI ANIAAIILIR MIGKNLTDKS
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