Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2691 |
Symbol | |
ID | 1184343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2984539 |
End bp | 2985300 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637394059 |
Product | membrane protein, TerC family |
Protein accession | NP_792498 |
Protein GI | 28869879 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0861] Membrane protein TerC, possibly involved in tellurium resistance |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.607869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAATACC TATTGGAACT GGCGACAAGT CCCGCAGCCT GGATCGCCTT GGCGACACTG GTGGTGATGG AAGTCGTGCT GGGCATCGAC AACCTGATTT TCATTTCGAT CATCACCAAC AAGCTTCCGG AACATCAGCG CGAAAAGGCC CGCAAGCTGG GTATCGGCAT GGCTCTGGTG ATGCGCCTGG GCTTGCTCAG TACCGTCGCT TACATCGTCC AGCTGACAGA ACCTGTGTTC GAGGTGTTCA ACCAGGCGTT CTCGTGGAAA GACATGATCC TGATCGCCGG TGGTCTGTTC CTGGTCTGGA AGGCAACCAC TGAAATCCAT CACAGCATGG ACATCAAGAC CGATGAAGAG AAGGCCCTGG GTTCGGTTGT GGCATTGAGC ATGGGCGCGG CCATTGTGCA GATCCTGATG CTGGACCTGG TGTTCTCCAT CGACAGTATC ATTACTGCCG TCGGCATGAC CGAACACCTG CCTATCATGA TCATCGCCGT GGTGTCCGCT GTGGTCGTGA TGCTGGTTGC CGCCAACCCG CTGGCGAAGT TCATCAACGA CAACCCGACT GTGGTCATGC TGGCACTGGG CTTTTTGATC ATGATCGGTA TGACGCTGAT CGCCGAAGGT TTTGGTGCCC ACGTACCGAA AGGCTACATC TACGCTGCCA TGACATTCTC GGCAGCCATT GAAGGCCTGA ACATGCTGGT GCGCAAGGCA AGACGCAAAA AGGCTGCCGC TGCTCAGGCA TCCACTCACT GA
|
Protein sequence | MEYLLELATS PAAWIALATL VVMEVVLGID NLIFISIITN KLPEHQREKA RKLGIGMALV MRLGLLSTVA YIVQLTEPVF EVFNQAFSWK DMILIAGGLF LVWKATTEIH HSMDIKTDEE KALGSVVALS MGAAIVQILM LDLVFSIDSI ITAVGMTEHL PIMIIAVVSA VVVMLVAANP LAKFINDNPT VVMLALGFLI MIGMTLIAEG FGAHVPKGYI YAAMTFSAAI EGLNMLVRKA RRKKAAAAQA STH
|
| |