| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2664 |
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| Symbol | |
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| ID | 1184316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2960581 |
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| End bp | 2961735 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394032 |
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| Product | spermidine/putrescine ABC transporter, ATP-binding protein |
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| Protein accession | NP_792471 |
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| Protein GI | 28869852 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0379028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCCG TGATCAAAGA CCCCGCCCCA GCGCATCAGA AACCGCTGGT TGCGCTGTGC
AACCTGAACA AGCATTACGG TGACTTCGCA GCCGTCGATG ATATTTCTCT GGAGATTCAG
GACGGTGAAT TCCTGACGTT TCTGGGCTCC AGTGGCTCGG GTAAAAGCAC CACGTTGTCG
ATGCTCGCCG GTTTCGAGAC GCCCAGTTCA GGTGAAATCC TGGTCAGCGG CAAATCGCTG
GTCAATGTGC CGCCGCACAA GCGCGACATC GGCATGGTGT TCCAGCGCTA CTCGCTGTTC
CCGCACCTGT CGGTTCGCGA CAACATTGCC TTCCCGCTGG CGATCCGCAA GCTGCCAGCA
GCCGAGCGCG AAAAGAAGGT CGATGCCATG CTCAAGCTGG TTCAACTGGA AGCCTTCGCT
CATCGTCGCC CTTCGCAATT GTCCGGTGGC CAGCAGCAAC GGGTCGCCAT TGCCCGGGCG
CTGGTTTACG AGCCACGCAT CCTGCTGATG GACGAACCCC TCGGTGCGCT GGACAAGAAG
CTGCGCGAAG ACCTGCAGGA CGAATTGCGC CAGTTGCACC GCAGGCTAGG CATCACCATT
GTCTACGTGA CCCACGATCA GGAAGAAGCC ATGCGCCTGT CCCAGCGCAT CGCGATTTTC
AGCCACGGCA AGATCGTCGG TCTGGGCACC GGTTACGACC TGTATCAGAA CCCGCCGAAT
GCCTTTGTCG CCTCGTTTCT GGGCAACTCG AACTTCCTTA AGCTCAAGGC ACAGGGCAAC
GCCGTTGCGA CGTTTGAAGG CAGTTCGCTG GCGATTCGGC TGACCTCCAA CCTCAAAACC
GATCAGGACG TGCTGCTGAT GGTGCGCCCG GAAAAAGCCC AGGCACTGAG TGTGGCCCAG
GCCGCCGCCA CGCCGCTGGA AGCCGGCTGG AACGAGGTCA GCGCCACTGT CACCGAGGTG
CTGTTTCTCG GCGAAAGCCA GACGTGCTCG GTGGTGACCA CTGGCGGCAC AGCGATGACC
GTCAAAGCGC TGTCCGCCAC CGGCATGCCC TTAAAAGCCG CAGATCCGGT GCGCGTGCGC
TGGGCCGCCG CCGATGCGTG TATCTACACC GAATGGACCG ACAGCGACCT GAACAAGGCG
GCTGGCGCGC ACTGA
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| Protein sequence | MSAVIKDPAP AHQKPLVALC NLNKHYGDFA AVDDISLEIQ DGEFLTFLGS SGSGKSTTLS
MLAGFETPSS GEILVSGKSL VNVPPHKRDI GMVFQRYSLF PHLSVRDNIA FPLAIRKLPA
AEREKKVDAM LKLVQLEAFA HRRPSQLSGG QQQRVAIARA LVYEPRILLM DEPLGALDKK
LREDLQDELR QLHRRLGITI VYVTHDQEEA MRLSQRIAIF SHGKIVGLGT GYDLYQNPPN
AFVASFLGNS NFLKLKAQGN AVATFEGSSL AIRLTSNLKT DQDVLLMVRP EKAQALSVAQ
AAATPLEAGW NEVSATVTEV LFLGESQTCS VVTTGGTAMT VKALSATGMP LKAADPVRVR
WAAADACIYT EWTDSDLNKA AGAH
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