| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2662 |
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| Symbol | |
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| ID | 1184314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2958422 |
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| End bp | 2959516 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637394030 |
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| Product | tartrate dehydrogenase |
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| Protein accession | NP_792469 |
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| Protein GI | 28869850 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.508333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAACA AGAAATTGCG CATTGCTGCC ATCGCCGGAG ACGGAATCGG CCTGGAGGTG
CTGCCCGAAG GCGTGCGCGT GGTGCAGGCT GCCGCCGCCA GACACGGGCT GGAGCTGCAG
TTCGAGTACT TCGAATGGGC CAGCTGCGAT TACTACCTGG AACACGGCAA GATGATGCCG
GACGACTGGT TTGATCAGTT GAAAAGCTTT GATGCGATTT TCTTCGGTGC TGTGGGCTGG
CCCGATAAAG TGCCCGATCA CATTTCCCTG TGGGGCTCGC TGCTCAAGTT TCGTCGCGAG
TTCGATCAGT ACGCCAACAT CCGCCCGGTG CGCCTGTTCC CCGGCGTACC CTGCCCGCTC
GCCAACCGTA AACCGGGCGA CATCGATTTT GTCGTGGTCC GGGAAAACAC CGAAGGTGAA
TACTCGTCGC TGGGCGGGAT CATGTTCGAG AACACCGACA ACGAATTCGT GCTGCAGGAA
TCGGTGTTCA CCCGTCGCGG TGTCGACCGC ATTCTCAAGT TCGCTTTCGA GATGGCCAGA
AAGCGCGAAC GCAAGCACGT CACCTCCGCG ACCAAATCCA ACGGCATGGC CATCAGCATG
CCCTACTGGG ACAAACGCAC CGAGGCGATG GCCAGCCACT ACCCGGAGAT CAGTTGGGAC
AAGCAACACA TCGACATCCT GTGCGCGCGT TTCGTGCTGC AACCGGAGCG CTTCGACGTG
GTGGTGGCCT CCAACCTGTT CGGCGACATC CTCAGCGACC TCGGCCCGGC CTGCGCAGGC
ACCATCGGCA TTGCGCCGTC GGCCAACCTC AACCCGGAGC GCCGCTTCCC GTCGCTGTTC
GAACCGGTTC ACGGCTCGGC GCCCGACATC TTCGGCAAGA ATATCGCCAA CCCGATCGCC
ATGATCTGGT CCGGCGCCCT GATGCTGGAA TTCCTCGGCC AAGGCGACAA GCGCTTCACG
GCGGCGCATG ACGAAATCAT CATGGCCATT GAACAGGCCA TCGCCAGCGG CGAGGTAACC
CCTGACCTGG GCGGCCAGCG CTCGACGCAG GAAGTGGGTG CGGCGATTGC GGGGCGGGTT
GGCGCGGCGC GTTAA
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| Protein sequence | MNNKKLRIAA IAGDGIGLEV LPEGVRVVQA AAARHGLELQ FEYFEWASCD YYLEHGKMMP
DDWFDQLKSF DAIFFGAVGW PDKVPDHISL WGSLLKFRRE FDQYANIRPV RLFPGVPCPL
ANRKPGDIDF VVVRENTEGE YSSLGGIMFE NTDNEFVLQE SVFTRRGVDR ILKFAFEMAR
KRERKHVTSA TKSNGMAISM PYWDKRTEAM ASHYPEISWD KQHIDILCAR FVLQPERFDV
VVASNLFGDI LSDLGPACAG TIGIAPSANL NPERRFPSLF EPVHGSAPDI FGKNIANPIA
MIWSGALMLE FLGQGDKRFT AAHDEIIMAI EQAIASGEVT PDLGGQRSTQ EVGAAIAGRV
GAAR
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