Gene PSPTO_2648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2648 
Symbol 
ID1184300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2941675 
End bp2942142 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content57% 
IMG OID637394017 
Producthypothetical protein 
Protein accessionNP_792456 
Protein GI28869837 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00225438 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGAG AAAACCAGGC AGTGGATCAC GACCGGAATT TTGAGCTGAT CTTTGGCGCT 
GCACAGAAAA TACTCGAAGC TGCCAAAGCC AATCAGGATG CTTCCATCAA AACAGCCGAG
TCCTTGAGAG CGCTTGAAAA GGGCTTCGAG CAAAGGCTAA GCAAGCTGGA AGGCACCGTC
ACAGAGAGTA TCGACAGCTC CGTGGACCGC ACCTCTACCA AAGCGGCCAA GCTGCTCTGC
GAAAAGTTCG ATGAAGCAGA CGCTGCGGCG ATTAGGGCTG CCAGGCTCTA CAACGCTTCA
GCCAAGGCGC TCGACAAACG TAGCTGGATT TACTTTCTTA CCGCACAGCT CGCGCTGGTG
GCCTGCGTGG CAGGGGCAGT CTATTTCTGG CTGCCTTCGT TCAACGAAGT CGCGGCGTGC
CGTGCCGAGC TGGCCAAACC CGAGGTGCGG GCTGCTCGCC CTCGATAG
 
Protein sequence
MNRENQAVDH DRNFELIFGA AQKILEAAKA NQDASIKTAE SLRALEKGFE QRLSKLEGTV 
TESIDSSVDR TSTKAAKLLC EKFDEADAAA IRAARLYNAS AKALDKRSWI YFLTAQLALV
ACVAGAVYFW LPSFNEVAAC RAELAKPEVR AARPR