Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2648 |
Symbol | |
ID | 1184300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2941675 |
End bp | 2942142 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637394017 |
Product | hypothetical protein |
Protein accession | NP_792456 |
Protein GI | 28869837 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00225438 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGAG AAAACCAGGC AGTGGATCAC GACCGGAATT TTGAGCTGAT CTTTGGCGCT GCACAGAAAA TACTCGAAGC TGCCAAAGCC AATCAGGATG CTTCCATCAA AACAGCCGAG TCCTTGAGAG CGCTTGAAAA GGGCTTCGAG CAAAGGCTAA GCAAGCTGGA AGGCACCGTC ACAGAGAGTA TCGACAGCTC CGTGGACCGC ACCTCTACCA AAGCGGCCAA GCTGCTCTGC GAAAAGTTCG ATGAAGCAGA CGCTGCGGCG ATTAGGGCTG CCAGGCTCTA CAACGCTTCA GCCAAGGCGC TCGACAAACG TAGCTGGATT TACTTTCTTA CCGCACAGCT CGCGCTGGTG GCCTGCGTGG CAGGGGCAGT CTATTTCTGG CTGCCTTCGT TCAACGAAGT CGCGGCGTGC CGTGCCGAGC TGGCCAAACC CGAGGTGCGG GCTGCTCGCC CTCGATAG
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Protein sequence | MNRENQAVDH DRNFELIFGA AQKILEAAKA NQDASIKTAE SLRALEKGFE QRLSKLEGTV TESIDSSVDR TSTKAAKLLC EKFDEADAAA IRAARLYNAS AKALDKRSWI YFLTAQLALV ACVAGAVYFW LPSFNEVAAC RAELAKPEVR AARPR
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