| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2640 |
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| Symbol | araH |
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| ID | 1184292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2934266 |
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| End bp | 2935255 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637394009 |
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| Product | L-arabinose ABC transporter, permease protein |
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| Protein accession | NP_792448 |
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| Protein GI | 28869829 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0418311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACAATA AAAAAGAGGT GCGTATGTCT ACCGAATCCA GCCTTCAGGC TCCCCGTCAG
GGCATGAACC TGCGTCGTTT TGTCGATGAC TGGGTGATGC TCCTGGCTGC CGTGGGAATT
TTCCTGCTGT GTGCCGTGTT CATCGACAAC TTCATGTCAC CGCTGAACAT GCGCGGTCTT
GGCCTGGCGA TTTCTACCGT GGGCATTGCC GCCTGCACCA TGTTGTTCTG CCTGGCGTCC
GGGCACTTCG ACCTGTCGGT GGGCTCGGTG CTGGCCTGCT CCGGGGTCAT CGCCGGTATC
GTCATTCGCG ACACCGACAG CGTGTTTCTC GGTGTGTCGG CAGCGCTGGC GCTGGGGCTG
GTGGTTGGCC TTATCAACGG CATCGTCATC GCCAAGCTGC GTATCAATGC GCTGATTGCG
ACATTGGCGA CCATGCAGAT CGTGCGCGGG CTGGCCTATA TCTTCTCCAA CGGCAAGGCC
GTCGGTGTTT CCAACGAAGA CTTCTTCATC TTCGGCAATG GCCAGATCTA CGGCGTGCCG
GTGCCTATTC TGATCACCAT CGCCTGCTTC ATGTTCTTCG GCTGGTTGCT CAACTACACC
ACCTACGGGC GCAACACGAT GGCCATCGGC GGTAACCAGG AAGCCGCGCT GCTGGCGGGC
GTGCATGTCG ATCGCACCAA GATCATCATC TTCGCAGTAC ACGGCCTGAT CGGTGCGTTG
GCGGGTGTGG TACTGGCTTC CCGCATGACC TCGGGCCAAC CGATGATCGG CCAGGGCTTT
GAGCTGACCA TCATCTCGGC TTGTGTGCTG GGCGGGGTCT CGCTAAGTGG CGGTATCGGC
ATGATTCGTC ATGTGATCGC TGGCGTGCTG ATTCTGGCAA TCATCGAGAA CGCGATGAAC
CTGAAGAACA TCGACACCTT CTACCAGTAC GTGATTCGCG GCACGATTCT GCTGTTGGCG
GTGATCATTG ACCGGATGAA GCGTCGCTGA
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| Protein sequence | MNNKKEVRMS TESSLQAPRQ GMNLRRFVDD WVMLLAAVGI FLLCAVFIDN FMSPLNMRGL
GLAISTVGIA ACTMLFCLAS GHFDLSVGSV LACSGVIAGI VIRDTDSVFL GVSAALALGL
VVGLINGIVI AKLRINALIA TLATMQIVRG LAYIFSNGKA VGVSNEDFFI FGNGQIYGVP
VPILITIACF MFFGWLLNYT TYGRNTMAIG GNQEAALLAG VHVDRTKIII FAVHGLIGAL
AGVVLASRMT SGQPMIGQGF ELTIISACVL GGVSLSGGIG MIRHVIAGVL ILAIIENAMN
LKNIDTFYQY VIRGTILLLA VIIDRMKRR
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