| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2637 |
|---|
| Symbol | |
|---|
| ID | 1184289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 2930623 |
|---|
| End bp | 2931495 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637394006 |
|---|
| Product | senescence marker protein-30 family protein |
|---|
| Protein accession | NP_792445 |
|---|
| Protein GI | 28869826 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3386] Gluconolactonase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0164591 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTGGC TGCCCGTTTC CGAGCACCGT TTCAAACTGG CTGAAGGCGC CTTCTGGGAT
GCCGAAGCAG AGGCCCTGTA CTGGGTCGAC ATCGCCGGAT TTCTGGCCTG TCGGCTGGTC
GCCGGGGAGT ATCGTCAATG GCGCATGCCT GAGCCGGTGT CCGCGTTTAT CCCCACTGAA
CAGGGCGATG CGCTGGTGAC ACTGGCCAGC GGCGTCTATC GCCTGGACCT GACCTCTGAA
AGAACCTCAT TGTCGTTGTT CTGTGTCGCA GACCCGACCC CCGGTAATCG CGCCAATGAA
GCCCGTTGCG ATGCGAACGG CCGCCTCTGG CTGGGCAGCA TGCAGAACAA TATTGACGCC
GGAGGCGGCG ATGTACCTCT GGTTCGTCGT TCGGGCGGGT TGTTCCGGGT CGATGCCGAC
GCGAGCGTGA CGCGTTTGCT GGATGGGCAG GGCATCGTCA ACACCTTGCT ATGGAACACC
GACGGCAGCG TGCTGTACAG CGCCGATACC CTCGACGAGG TTATCTACCA ATACCCCGTG
CTGGTAGATG GCACGCTGGG GCCCCGCCGG GTCTGGGCGG CCGAGCAAAG CCGTGGTTCG
CCCGACGGTT CGGCGATGGA TGCCCAAGGC TATGTCTGGA ACGCGCGCTG GGGCGGCAGT
TGCCTGATCC GTTTTGCGCC CGATGGCAGC GTCGACCGGA TTGTCGATTT ACCGGTCAGC
CATCCCACCA GTTGCGTGTT CGCAGGTCCC GACCTGCAGA CGCTGTATGT CACCAGCGCA
GCGCCTGGCG ATGCGCTGGG GCAGTTCGAC GGCGCGGTAC TGACGGCGCA CGTCGGTGTC
AGCGGCAAAG CATGTCAGCG TTTTGCAGGC TGA
|
|---|
| Protein sequence | MNWLPVSEHR FKLAEGAFWD AEAEALYWVD IAGFLACRLV AGEYRQWRMP EPVSAFIPTE
QGDALVTLAS GVYRLDLTSE RTSLSLFCVA DPTPGNRANE ARCDANGRLW LGSMQNNIDA
GGGDVPLVRR SGGLFRVDAD ASVTRLLDGQ GIVNTLLWNT DGSVLYSADT LDEVIYQYPV
LVDGTLGPRR VWAAEQSRGS PDGSAMDAQG YVWNARWGGS CLIRFAPDGS VDRIVDLPVS
HPTSCVFAGP DLQTLYVTSA APGDALGQFD GAVLTAHVGV SGKACQRFAG
|
|---|
| |