Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2636 |
Symbol | galM |
ID | 1184288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2929175 |
End bp | 2930323 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637394005 |
Product | aldose 1-epimerase |
Protein accession | NP_792444 |
Protein GI | 28869825 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2017] Galactose mutarotase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0151396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGC ATGCTCTTCT CAGCACCTTT GGACTGTCCT TGATGATCAG TACCTTGACC GCACAGGCCG CAGCACTCTC CAGCGAACAC AGCGCGTTTG GGCAACTGCC CGATGGCAGC GCCATCGAGA AATATACCCT GCGCAACAGC CATGGCGTGC AGGCCAGCAT CATCACTTAT GGCGCAACCC TGCAATCACT GCTGGTGCCC GACAAGGCTG GCAAGGTGGA AGACATCGTG CTGGGCTTCG ACGATGTGCA GGGCTATCAG AGCAACGGCA CGGTTTATTT TGGCGCGACC ATCGGCCGTT TCGGCAACCG TCTGGCGGGC GGCAAATTCA GTCTGGATGG CAAGACCTAC CAGGTTCCGC TCAACGACAA GACCAATGCC CTGCACGGCG GCGACAAGGG TTTCGACAAG CGACTCTGGA AGGCGGAAGA AACCAGGACC GGTGATTCGG TCGGCGTGAA ACTGACCTAC GTGTCGCCGG ATGGCGAGAT GGGTTTCCCG GGCACGTTGC AGACTGAAGT CACCTACAGC CTGAACGACA AGAATGAACT GAAAATCGAC TACCGCGCCA CCACCGACAA ACCCACGGTG CTGAACCTGA CCAACCACAG CTATTTCAAC CTCGCGGGCG CAGGCAGCGG CGATGTGCTC AAGCAGGTCG CCACCCTTCA CGCTTCGCAC TACACCCCGG TCAACGACAA GCTGATCCCG ACGGGCGAAC TGCCCGCCGT CGCCGGCACG CCGATGGACT TCCTCAAGCC CACCGCGTTT GGCAAACACA TCAAGGATGA CCACCAGCAG CTGAAATATG CCGAACCCAA ACAGGGCGGC TTTGATTTCA ACTGGGTGCT GGACAGCAAA GGCGATGTGA AGAAACTCGC CGCCGAGGTC AGCGACCCGC AATCGGGCCG CACGCTGCAA TTGTTCACTA CCGAGCCCGG CGTGCAGCTG TACACCGGCA ACTTCCTGGA TGGCAGCATT CACGGCAAGG GCGGCAAGGT CTATCCGCAC TGGGGCGCTT TCACGCTGGA AACCCAGCAC TACCCTGACG CGCCCAACCA GCCGAAATTC CCCAGCACGC GACTGGACCC AGGCAAAGCC TACACCCAGA CCACTGTGTT CAAATTCCTG AACAACTGA
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Protein sequence | MKKHALLSTF GLSLMISTLT AQAAALSSEH SAFGQLPDGS AIEKYTLRNS HGVQASIITY GATLQSLLVP DKAGKVEDIV LGFDDVQGYQ SNGTVYFGAT IGRFGNRLAG GKFSLDGKTY QVPLNDKTNA LHGGDKGFDK RLWKAEETRT GDSVGVKLTY VSPDGEMGFP GTLQTEVTYS LNDKNELKID YRATTDKPTV LNLTNHSYFN LAGAGSGDVL KQVATLHASH YTPVNDKLIP TGELPAVAGT PMDFLKPTAF GKHIKDDHQQ LKYAEPKQGG FDFNWVLDSK GDVKKLAAEV SDPQSGRTLQ LFTTEPGVQL YTGNFLDGSI HGKGGKVYPH WGAFTLETQH YPDAPNQPKF PSTRLDPGKA YTQTTVFKFL NN
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