Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2519 |
Symbol | |
ID | 1184171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2782438 |
End bp | 2783622 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637393892 |
Product | oxidoreductase, FAD-binding protein |
Protein accession | NP_792331 |
Protein GI | 28869712 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.105812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTCGC TGATTGAAAC CGATGTGGTT GTCATCGGCG GCGGCATTGT CGGCTCGTCG GCAGCCCTGA GCCTCGCACT CAAAGGCCAG TGCGTTGCCC TGCTGGAGCG TGATTTCTGT GGCTCGCACT CCAGCGGCGT CAACTACGGC GGCGTGCGCC GTCAGGGTCG GCCCCTGTCG CAGTTGCCCC TGTCTCAACG GGCGCACCAG ATCTGGGGCG GCCTGCGTGA GTTGATCGGC ATCGACGGTG AATACCAGCG CTCCGGCCAT CTCAAGCTGG CGCGCAGCGA ACACGACATG AATGCCTTGC GTGCCTATGC GCAAGCCAGT CAGGGTTTTG GCCTGGACCT GCAATTGCTG GATCGCGAGC AACTACGCGC CCGTTACCCC TGGGCGGGCG ATGTAGCCGT CGGTGCGTCG CTGTGTGCTG ACGACGGACA CGCCAATCCG CGTCTGGTAT CGCCCGCCTT TGCCCGCGCC GCTCGCCAGG CAGGAGCGCA AGTGTTCGAG CAAGCAGCGG TGAGCGAGGT CAGCCATGAC GGCAGCGCTT TTATCGTCAG TACTGCCGAT GGCCTGAAGG TGCGGGCACC CTGGCTGCTC AACTGCGCAG GTGCCTGGGC TGGCGCGCTG GCGGCGCAGT TCAACGAACC GGTGCCAATG TATTCGGGGC ATCCAGCAAT GCTGGTCACC GAACCGCTGC CAATGTTCAT GGACGTCAGC ACCGGGGTCG AAGGCGGCGG CATCTACGCC CGGCAAGTGG CGCGCGGCAA TTGCGTGCTC GGCGGTGGTC AGGGCTTCGC GATTGACCCG GCACGCGCCA GACCCGGCCA GGCAGCGGTG CTCGACATCC TGCGCAATGC CGTCGAGCTT TACCCGCCGC TGGCCGGTGC CCAGGCCATC CGCACCTGGA GCGGCACCGA AGGCTACTTG CCGGATCGCG AACCGGTACT TGGGCCAAGC CTGACCCAGC CCGGTCTGTT GCACGGTTTC GGTTTTGCCG GAGCAGGTTT CCAGATCGGC CCGGCGGCAG GCGAAGCGCT GGCCGAATGG GTCTGCACGG GCGCGTCGCT GATCTCGCTT GAGACTTTTT CGATTGGCCG GTTCCGGCAA CCACCCATTC CACTCACCGC TAATGCACCC GTTTCGAACG TCATCCCATT GCACAGAGGA AGGTCGTCCC TATGA
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Protein sequence | MSSLIETDVV VIGGGIVGSS AALSLALKGQ CVALLERDFC GSHSSGVNYG GVRRQGRPLS QLPLSQRAHQ IWGGLRELIG IDGEYQRSGH LKLARSEHDM NALRAYAQAS QGFGLDLQLL DREQLRARYP WAGDVAVGAS LCADDGHANP RLVSPAFARA ARQAGAQVFE QAAVSEVSHD GSAFIVSTAD GLKVRAPWLL NCAGAWAGAL AAQFNEPVPM YSGHPAMLVT EPLPMFMDVS TGVEGGGIYA RQVARGNCVL GGGQGFAIDP ARARPGQAAV LDILRNAVEL YPPLAGAQAI RTWSGTEGYL PDREPVLGPS LTQPGLLHGF GFAGAGFQIG PAAGEALAEW VCTGASLISL ETFSIGRFRQ PPIPLTANAP VSNVIPLHRG RSSL
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