Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2354 |
Symbol | |
ID | 1184005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2608674 |
End bp | 2609600 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637393730 |
Product | glycosyl transferase, group 2 family protein |
Protein accession | NP_792170 |
Protein GI | 28869551 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.218636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTCAT TGAGAGTGGC TTGTGTCATC CCGACCTACA ACGGCCGCAA GGACCTGGAG CGGCTGCTGG ATTCACTGGC CACGCAGACG GCGAGCTTCG ACACGCTGAT CGTGGATTCC AGTTCTTCGG ACGGCACGCT GGAACTGGCG CAAGCCCGCT GCGCCAATGT GCTGCGCATT GACAGCAAGG ATTTCAACCA CGGCGGCACC CGGCAGATGA TGGTCGATGT GCACCCGGAC TACGACGTCT ACGTCTACAT GACCCAGGAC GCCTACGTCG AAGACATCGA CGCCATCGCC AATATTCTGC TGCCCTTCGC TGACCCGAAA GTCGGTGCCG TGTGTGGCCG TCAATTGCCG CACAAGAACG CTAACCTGCT GGCCCAGCAT GCACGGCTGT TCAACTACCC GCCGACTTCG CAGATCAAGA CCCTGGCAGA CGCTGGCACC CTGGGCATCA AGACGCCGTT CATGTCCAAT TCCTTCGCGG CCTATCGTGG CGAGGCGCTG CGGGCGATCG GTGGCTTTCC TCGGCATGTG ATCCTCTCCG AAGACATGTA CGTCACGGCG AAAATGCTCA TCGATGGCTG GAAAGTGGCC TACGAAGGCT CTGCCGTGTG CCGTCATTCT CACAACTACA GCCTGCGCGA AGAGTTCTGC CGCTACTTCG ACATTGGCGT GTTTCAGTCC CGAGAAGCTT GGATCTACGA GACGTTCGGC GGGATTGGCG GCGAGGGCAT GCGCTACGTG AAATCCGAGC TGAAATTCCT CGGCCCGCGG CGCCTCCTCT GGTGGCCCAT GTCGTTTGTG CGCAATGCGC TGAAACTGCT GGCCTACAAG CTGAGCAAAC AGGAGAAACG CTTGCCCCGT GGTTTGAAGA AAAAGCTCGG GATGTACAAG CGCTACTGGG ACAGCCCTTA CGCGTGA
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Protein sequence | MASLRVACVI PTYNGRKDLE RLLDSLATQT ASFDTLIVDS SSSDGTLELA QARCANVLRI DSKDFNHGGT RQMMVDVHPD YDVYVYMTQD AYVEDIDAIA NILLPFADPK VGAVCGRQLP HKNANLLAQH ARLFNYPPTS QIKTLADAGT LGIKTPFMSN SFAAYRGEAL RAIGGFPRHV ILSEDMYVTA KMLIDGWKVA YEGSAVCRHS HNYSLREEFC RYFDIGVFQS REAWIYETFG GIGGEGMRYV KSELKFLGPR RLLWWPMSFV RNALKLLAYK LSKQEKRLPR GLKKKLGMYK RYWDSPYA
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