| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2198 |
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| Symbol | sdhB |
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| ID | 1183849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2418510 |
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| End bp | 2419214 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637393579 |
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| Product | succinate dehydrogenase, iron-sulfur protein |
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| Protein accession | NP_792019 |
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| Protein GI | 28869400 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0187678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGCAAG TCAGTGTTTA TCGTTACAAC CCTGATCAGG ACGCTGCTCC GTTCATGCAG
GAGTTTCAGG TCGATACCGG TGGCAAGGAC CTGATGGTGC TGGACGTGCT GGCGCTGGTC
AAAGAACAGG ACGAAGGCTT TTCGTACCGT CGTTCGTGCC GTGAAGGCGT GTGCGGCTCC
GATGGCATGA ACATCAATGG CAAGAACGGC CTGGCGTGCA TCACGCCGCT GTCTGCGGTT
GTCGCCAAGA ACAAGCTGGT TGTCCGTCCT CTGCCAGGTT TGCCGGTTAT TCGTGACCTG
GTCGTCGATA TGAGCATCTT CTACAAGCAA TACGAGAAGG TGAAGCCATT CCTGCAGAAC
GACACGCCGG CTCCGGCCAT CGAACGTCTG CAAACGCCAG AAGAGCGCGA AAAGCTCGAT
GGTCTGTACG AGTGCATTTT GTGCGCTTGC TGCTCGACCT CCTGCCCGTC CTTCTGGTGG
AACCCCGACA AGTTCCTCGG TCCAGCTGCA CTGCTGCAAG CCTATCGTTT CCTGGCTGAC
AGCCGTGACA CCCGCACCAA CGAGCGTCTG GCTTCGCTTG ATGACCCGTT CAGCGTATTC
CGCTGCCGCG GCATCATGAA CTGCGTCAAC GTATGTCCGA AGGGCCTGAA CCCAACCAAG
GCTATCGGTC ACGTGCGCAA CATGTTGTTG CAAAGCGGCA TCTGA
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| Protein sequence | MLQVSVYRYN PDQDAAPFMQ EFQVDTGGKD LMVLDVLALV KEQDEGFSYR RSCREGVCGS
DGMNINGKNG LACITPLSAV VAKNKLVVRP LPGLPVIRDL VVDMSIFYKQ YEKVKPFLQN
DTPAPAIERL QTPEEREKLD GLYECILCAC CSTSCPSFWW NPDKFLGPAA LLQAYRFLAD
SRDTRTNERL ASLDDPFSVF RCRGIMNCVN VCPKGLNPTK AIGHVRNMLL QSGI
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