| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2183 |
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| Symbol | |
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| ID | 1183834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2403892 |
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| End bp | 2404785 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393565 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | NP_792005 |
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| Protein GI | 28869386 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACTCG CTTTTTCCCC TGATGGCAAT GCCACGCTTG TGTCCCTGAT TCAGCCGCTG
GCGGTACGTC CCGGCTTTGT GGCCACGCAT TTGCCCGCGG TCCGTGTGCT GTCGGCTTTT
GGTTATGTGG CCAGTAGCCC GCAGATCTAC GAGCCGAGCC TGATGATTGT GGTGCAGGGC
AGCAAAGTCG CCTGTCTGGG GCCGCGCACT TTTGAATACG GCACTGGGCA TTACCTGATT
CAGGCGCTGT CGGTGCCGTT CAAATGCGAG ACCTTCGCCA CCCCGGGCAA GCCGCTGTAT
GGCGTGTCGG TGGCCATCGA CCGCGTGCTG CTTGGCGAGC TGGTGCAAGC GATGGGCCCG
GCCAGCGGCC AGGAAAGCCA GATGCAGACC CCGGAGTCCA TGACATCGGT ACGCATCGAC
CCTGCGATGC GCGACAGCGT CGAACGCCTG TTGCGCTGTC TGCACGATCC GCTGGAGTGT
CAGGCGATGG GGCAGGCGCG CATTCGTGAA GTGCTGTACA GCGCGCTACG CGGCCCGCAA
TCGGGTGTAT TGCGGGCGCT GGTCGAGCAA CAGGGGCAGT TTGCGCGGAT CGCCTCGGCG
GTGACGTATC TGCATGATCA TTACGATCAC GCATTGAACG TCGACACCCT GGCGCGCTGC
GCGAACATGA GCACCTCGAC CTTCCACGAA CACTTCAAGC GCAGTACGTT ATTGTCGCCT
GTGCAGTACC TCAAACGCCT GCGCCTGCTC AAGGCCCAGC AATTGCTGGT AGCCGACGGG
TTGAACGTGG CGCAGGTCGC GCTCAGGGTC GGCTATCAGA GCGCGTCGCA GTTCAGTCGG
GAATACAAGC GCTATTTTGA ACGGAGTCCT GGAGAGGCTA GCTGCAAGCC ATAA
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| Protein sequence | MSLAFSPDGN ATLVSLIQPL AVRPGFVATH LPAVRVLSAF GYVASSPQIY EPSLMIVVQG
SKVACLGPRT FEYGTGHYLI QALSVPFKCE TFATPGKPLY GVSVAIDRVL LGELVQAMGP
ASGQESQMQT PESMTSVRID PAMRDSVERL LRCLHDPLEC QAMGQARIRE VLYSALRGPQ
SGVLRALVEQ QGQFARIASA VTYLHDHYDH ALNVDTLARC ANMSTSTFHE HFKRSTLLSP
VQYLKRLRLL KAQQLLVADG LNVAQVALRV GYQSASQFSR EYKRYFERSP GEASCKP
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