Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2131 |
Symbol | |
ID | 1183778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2304137 |
End bp | 2305321 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637393509 |
Product | sensor histidine kinase |
Protein accession | NP_791953 |
Protein GI | 28869334 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAGCC CACCCCACGA CCCGGCAAGC GCGCTGGCCA TCCGCAACCA TTATCGCCAG TCGCAAAGCC GTGCCGCACG CCTTCGTCTG CTGGTCGATA CGGGTCAGGA ACTGATCCAG TTGCCCCCCG AAGCCATGCG CAAATGCGTG TTGCAGCGAG CGTGCGCGTT TGTGGCGATG GACCACGGCC TGCTGCTGGA ATGGGGCGCC GACAACGGCG TGCAGACCAC CGCCCGTCAT GGCAGCAAAG AACGCCTGAG CACCCTCGAA ACGACTGCCG ACCCGCTGGC CATCGGTCCG CAATGGCTGG AGCGGCCGGG CACTCACCTG CCCTGCGTAC TGCTGCTGCC TTTGCGCGGC GCCGATGAGG GCTCTTTCGG TACGCTGGTG CTGGCCAACA GCGTCGCCAT CAGCGCACCC GATGGTGAAG ACATCGAGTC TCTGCAACTG CTCGCCACCC TGCTCGCGGC GCATCTGGAG AACAATCGCC TGCTCGAAGC GCTGGTTGCG CGCGACCGAA CCATGTCACA ACTGGTTCGT CAGCTGTTCA CAGCGCAGGA AGACGAACGC AAACGCGTGG CCTACGACCT GCATGACGGG CTGGCCCAGA CTCTGGCTGG CCTTCACCAG CGCTTGCAGG GGTTTGCCGG TCGCTGCCCG GAACTGCCAG CGCAACTGGA CGCCGATCTG CAGGCCATCC TGAAACTGGC GCAGCATTGC GTTGGTGAGG GTCGGCAATT GATCAGCGGC CTGCGACCGG CCGTGCTGGA CGATTTCGGG CTGTGGCAGG CCGTCGACAA GGAAGCCGAT CGGCTGCGTG AAGCGGGCAT CATCGTGCAG TGGACGTCGC AGTCTCTGGA GCGCCTGCCC AGCCACCTGG AAATCGCACT GTTCCGCATC GCTCAGGAAG GCATCAATAA CGTGCTCAAG CACGCCAATG CCAGTTGCGT AGAACTGGCG CTGGAACTGA GTGACGGAAA CGTTTCACTA AGGCTGCAGG ACAACGGCCG TGGTTTCATC ACCGAAAAAC CAATCAACGG CACGGGCGTG CAGAAGCTGG GCCTGGTGGC CATGCAGGAA CGCGCCAGCC TGCTGGGTGG CCGCCTGACC TGCGTCAGCC GCCCCGGGCG TGGCACCCGG CTACGCACCA TCGTCCCTTT TACTGCAGAC AAGGCAATAA CATGA
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Protein sequence | MQSPPHDPAS ALAIRNHYRQ SQSRAARLRL LVDTGQELIQ LPPEAMRKCV LQRACAFVAM DHGLLLEWGA DNGVQTTARH GSKERLSTLE TTADPLAIGP QWLERPGTHL PCVLLLPLRG ADEGSFGTLV LANSVAISAP DGEDIESLQL LATLLAAHLE NNRLLEALVA RDRTMSQLVR QLFTAQEDER KRVAYDLHDG LAQTLAGLHQ RLQGFAGRCP ELPAQLDADL QAILKLAQHC VGEGRQLISG LRPAVLDDFG LWQAVDKEAD RLREAGIIVQ WTSQSLERLP SHLEIALFRI AQEGINNVLK HANASCVELA LELSDGNVSL RLQDNGRGFI TEKPINGTGV QKLGLVAMQE RASLLGGRLT CVSRPGRGTR LRTIVPFTAD KAIT
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