Gene PSPTO_2131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2131 
Symbol 
ID1183778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2304137 
End bp2305321 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content64% 
IMG OID637393509 
Productsensor histidine kinase 
Protein accessionNP_791953 
Protein GI28869334 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAGCC CACCCCACGA CCCGGCAAGC GCGCTGGCCA TCCGCAACCA TTATCGCCAG 
TCGCAAAGCC GTGCCGCACG CCTTCGTCTG CTGGTCGATA CGGGTCAGGA ACTGATCCAG
TTGCCCCCCG AAGCCATGCG CAAATGCGTG TTGCAGCGAG CGTGCGCGTT TGTGGCGATG
GACCACGGCC TGCTGCTGGA ATGGGGCGCC GACAACGGCG TGCAGACCAC CGCCCGTCAT
GGCAGCAAAG AACGCCTGAG CACCCTCGAA ACGACTGCCG ACCCGCTGGC CATCGGTCCG
CAATGGCTGG AGCGGCCGGG CACTCACCTG CCCTGCGTAC TGCTGCTGCC TTTGCGCGGC
GCCGATGAGG GCTCTTTCGG TACGCTGGTG CTGGCCAACA GCGTCGCCAT CAGCGCACCC
GATGGTGAAG ACATCGAGTC TCTGCAACTG CTCGCCACCC TGCTCGCGGC GCATCTGGAG
AACAATCGCC TGCTCGAAGC GCTGGTTGCG CGCGACCGAA CCATGTCACA ACTGGTTCGT
CAGCTGTTCA CAGCGCAGGA AGACGAACGC AAACGCGTGG CCTACGACCT GCATGACGGG
CTGGCCCAGA CTCTGGCTGG CCTTCACCAG CGCTTGCAGG GGTTTGCCGG TCGCTGCCCG
GAACTGCCAG CGCAACTGGA CGCCGATCTG CAGGCCATCC TGAAACTGGC GCAGCATTGC
GTTGGTGAGG GTCGGCAATT GATCAGCGGC CTGCGACCGG CCGTGCTGGA CGATTTCGGG
CTGTGGCAGG CCGTCGACAA GGAAGCCGAT CGGCTGCGTG AAGCGGGCAT CATCGTGCAG
TGGACGTCGC AGTCTCTGGA GCGCCTGCCC AGCCACCTGG AAATCGCACT GTTCCGCATC
GCTCAGGAAG GCATCAATAA CGTGCTCAAG CACGCCAATG CCAGTTGCGT AGAACTGGCG
CTGGAACTGA GTGACGGAAA CGTTTCACTA AGGCTGCAGG ACAACGGCCG TGGTTTCATC
ACCGAAAAAC CAATCAACGG CACGGGCGTG CAGAAGCTGG GCCTGGTGGC CATGCAGGAA
CGCGCCAGCC TGCTGGGTGG CCGCCTGACC TGCGTCAGCC GCCCCGGGCG TGGCACCCGG
CTACGCACCA TCGTCCCTTT TACTGCAGAC AAGGCAATAA CATGA
 
Protein sequence
MQSPPHDPAS ALAIRNHYRQ SQSRAARLRL LVDTGQELIQ LPPEAMRKCV LQRACAFVAM 
DHGLLLEWGA DNGVQTTARH GSKERLSTLE TTADPLAIGP QWLERPGTHL PCVLLLPLRG
ADEGSFGTLV LANSVAISAP DGEDIESLQL LATLLAAHLE NNRLLEALVA RDRTMSQLVR
QLFTAQEDER KRVAYDLHDG LAQTLAGLHQ RLQGFAGRCP ELPAQLDADL QAILKLAQHC
VGEGRQLISG LRPAVLDDFG LWQAVDKEAD RLREAGIIVQ WTSQSLERLP SHLEIALFRI
AQEGINNVLK HANASCVELA LELSDGNVSL RLQDNGRGFI TEKPINGTGV QKLGLVAMQE
RASLLGGRLT CVSRPGRGTR LRTIVPFTAD KAIT