| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2129 |
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| Symbol | |
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| ID | 1183776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2301148 |
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| End bp | 2303388 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637393507 |
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| Product | sensory box histidine kinase/response regulator |
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| Protein accession | NP_791951 |
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| Protein GI | 28869332 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.706377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTCGC TGGTGCTCAT CTACATCGCC GAACGCCAGA CCGCGCAAGC CGAGGAAGAT
GTGCGCCGGG TGCTGCTGGT GCAGGGCGAC ATTCAGACGC TTCATACCCA AATCGCAGAA
GGTGCGGCCA GTGTGCGTGG CTATCTGCTC ACCCATCAGG AAGACTTCCT GCCCGGCTAC
ATCAATGCGC AACCGCTGAT AAACGCGGCG CTGGTGCGGC TCGATGCCAA TATCCGTGAT
CAGCAGATGC GCGAGCACCT CAAATCCATC GAACCGCTGA TCCGCACCAA GGTGGACGGC
CTGGAAAGGC TGCGTTCGAT GGGCAGGGAA GACCACGAAA ACGTTGCCGC CATTCTGGTC
GAAAACAAGT ACGTTCTCGA CCAGTTGCGC GAACGGATCG GCGTGATGCG CGAGCGCGAG
GACGCCCTGC TGGCGGAGCG TACAGAAGCG GCGGCGGCGA CCCGTGAGCG CTTGTTGTGG
TCTACCCTGC TGGCGGCGGC CTGCGGAATT TTCGGTGCCA TTCTTGCGGT ACTGATGCTG
TCCAAGGGCA TCGTCGCCAG GGTGCATCAG GTGCAACGCA ATGCTCAGCG TCTGGCGCTC
GGGCACCCGT TGCTGCCCCA GCCACCCGAA AAAGACGAGA TCGGTCAACT CGGCACGCGC
CTGGTCGAAG CTGGCCAGTT GCTGGCCGAA CGCGAACGGG CGCTGCGCGA CAACGAGGAG
CGCTTGCGGC TGATTATCGA AGGCGTGAAG GATTACGGCA TTTTTGCGCT GGACCGCAAT
GGCTATGTCA CCACCTGGAA CGCAGGCGCC GAACGCATCA AGGGCTACAC CGAGCAGGAA
ATCATCGGCC AGCATTTCTC GGTTTTCTAT CTGCCGCAAG AGTGCCCGCA ACACCCTGAC
ATGGCGCTGC ACGAAGCCAC CGTCAACGGA CGCTACACAG AAGAGAGCTG GCGACGGCGC
AAGGATGGCA GCCGTTTCTG GGCCAGCGTG GTGATCACCG CGCAATACGA CAGCAACGAT
GAGCTACGTG GTTTTTCCAA GATCACCCGC GACATCAGCG ATCGTCGCGT TGCCGAAATT
GCCCTGGGTA CTGCGCGTGA AGAAGCCGAG CGCGCCAGCC GGGCGAAGAG TGAATTTCTC
TCGCGCATGA GCCATGAACT GCGCACGCCC CTGAACTCCA TTCTGGGCTT CGCCCAGTTG
CTGGACATGG ATTCGCCCGC CAGCCAGAGG CCGCAAGTAG GCCATATCCT GCGCGCGGGC
CAGCATTTGC TGAAGTTGAT CAATGAAGTG CTCGACATCG CCAGAATCGA AGCCGGGCAT
GTGTCCCTGA GCCTCGAACC GGTCTCGCTG TCCAGCGTCC TCAAGGAAAC GCTGGTGCTG
GTTTCGCCGA TGGCTGCGGA TGGCAACATC GAGCTCAAAG AGTTGCCGCA CCTGCCTGAC
GAACTCGGCG TTATCGCTGA CCGCCAGCGT CTGGTTCAGG TGCTGCTGAA CCTGCTGTCC
AACGCCATCA AGTACAACCG CCCCGACGGT CAGGTGCGCA TTGAGGTCGA CAGGTCGGCT
GAGCACGTCA CCGTGAGCGT GGTAGACACC GGCTATGGCA TTGCGCCGGA GCGTCTCGGT
CAGTTGTTCA AGCCGTTTGA ACGGCTGGAT GCCAACCCGA GCGTCGAAGG CACAGGGCTG
GGGCTGGCGC TGAGCAAGAG CATGCTGGAG ATGATGAAAG GCACGCTGTC AGTGCAAACC
ACACAGAACG AAGGTTGCCG TTTCACCCTT GCACTGCCTT TTGTTGCCGT GCACGCGCCG
ACCGTTGCGA CGCCGCGTCC GGCCGATGCC GTACCAATAA CCCGCCCCGC TGCTCGTCCG
GCTTATCATG GCAAGCTGCT GTGTATCGAA GACAACCTGT CGAGCATGGC GCTGATCGAA
ACGCTGTTGC AGCGCAGACC CGGCATCCAG TTGTTGTCGA GCATGCAGGG GCAACTGGGG
CTGGACCTGG CACGCCAACA TGCGCCCCAG CTGATTCTGC TGGACCTCAA CCTGCCGGAC
ATCAAAGGGC TGGAGGTGCT GCAACGCCTG AGGCGCCTGC CCGCAACCGC CAACACGCCG
GTGCTGATGA TTACCGCCGA CGCCAGCGTC AATGCCCAAC GCGAACTGAA AGAGGCCGGA
GCAACGGCCA TTCTGATCAA ACCCATCCAG GTGCCGGTGT TCCTCGCCCT CCTGGACCAG
TACTTGCCGG AGCCCGTATG A
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| Protein sequence | MFSLVLIYIA ERQTAQAEED VRRVLLVQGD IQTLHTQIAE GAASVRGYLL THQEDFLPGY
INAQPLINAA LVRLDANIRD QQMREHLKSI EPLIRTKVDG LERLRSMGRE DHENVAAILV
ENKYVLDQLR ERIGVMRERE DALLAERTEA AAATRERLLW STLLAAACGI FGAILAVLML
SKGIVARVHQ VQRNAQRLAL GHPLLPQPPE KDEIGQLGTR LVEAGQLLAE RERALRDNEE
RLRLIIEGVK DYGIFALDRN GYVTTWNAGA ERIKGYTEQE IIGQHFSVFY LPQECPQHPD
MALHEATVNG RYTEESWRRR KDGSRFWASV VITAQYDSND ELRGFSKITR DISDRRVAEI
ALGTAREEAE RASRAKSEFL SRMSHELRTP LNSILGFAQL LDMDSPASQR PQVGHILRAG
QHLLKLINEV LDIARIEAGH VSLSLEPVSL SSVLKETLVL VSPMAADGNI ELKELPHLPD
ELGVIADRQR LVQVLLNLLS NAIKYNRPDG QVRIEVDRSA EHVTVSVVDT GYGIAPERLG
QLFKPFERLD ANPSVEGTGL GLALSKSMLE MMKGTLSVQT TQNEGCRFTL ALPFVAVHAP
TVATPRPADA VPITRPAARP AYHGKLLCIE DNLSSMALIE TLLQRRPGIQ LLSSMQGQLG
LDLARQHAPQ LILLDLNLPD IKGLEVLQRL RRLPATANTP VLMITADASV NAQRELKEAG
ATAILIKPIQ VPVFLALLDQ YLPEPV
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