| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2120 |
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| Symbol | |
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| ID | 1183767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2294146 |
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| End bp | 2295393 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393498 |
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| Product | peptidase, M20/M25/M40 family |
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| Protein accession | NP_791942 |
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| Protein GI | 28869323 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACTCAC GATCTTTCCC TACTGTCGCC GCCCTCGGTT TTTCCCTGCT GTCTCTGGGC
GCATTGGCCG CCGATCTGTC ACCTGATCAA CTGCTGAACA AAGCCCAGGC TGAACAAAAA
GCCTATCTGG CCACGGTCAA GGAGCTGGTG GGCGTCGACA CGGGCACCGG CCAGGCACCG
GGCCTGAAAA CCGTCAGCGC GCTACTGGTC GAACGCCTTA AGGCGCTGGG CGCCGAGGTC
ACAACGACGC CTGCGAACCC CTCCGCCGGT GACAACATTG TCGGCACGTT CAAGGGCAAC
GGCACCCGAT CCTTTTTGCT GATGGTCCAT TACGACACCG TGTTCGGCCC TGGCACCGCC
GCCAGGCGTC CGTTTCGGCT CGACAGCGAG CGTGCCTACG GCCCGGGAGT TGCAGACGCC
AAAGGCGGTG TAGCGATGAT CCTGCATTCG CTGAAACTGT TGCAGGACGA GCAGTTCAAA
GACTTCGGCA CACTGACCGT GCTGTTTAAC CCTGACGAAG AAACCGGTTC CAGCGGTTCG
AAAAAAGTCA TCGCTGAACT GGCTCGCCAG AACGATTACG TTTTCTCTTA CGAGCCGCCG
GACAAGGACG CTGTGACGGT AGCCACCAAT GGCATCAATG GCCTGCTGCT CGACGTCAAG
GGCAAGTCTT CGCACGCAGG TTCCGCCCCC GAAGCCGGGC GCAATGCAGC CATTGAGCTG
GCGCATCAGA TGCTGCAACT CAAGGACCTT GGCGACCCAG GCAAAGGCAC CACTGTTAAC
TGGACGCTGA TCAAGGGCGG GGAGAAGCGC AACATCATTC CCTCCAGCGC CTCGGCCGAA
GCGGACATGC GCTACTCCGA TCCAAGCGAG AGCGACCGGG TAATGGCTGA CGGCCAGCGT
CTTGTCAGGA AAACCCTCGT GGATGGCACC GAAGTGACCT TGCGCATGGA AAAAGGCCGT
CCACCGCTGG CCAAAAACCC TGGCTCCGAG CAACTGGCAA AAACTGCGCA GACGCTTTAC
GCCAAAATCG GTCGCAGCAT CGAGCCGATT GCCATGCGTT TCGGCACGGA TGCGGGCTAC
GCCTATGTGC CGGACAGCGC CAAGCCAGCG GTGCTGGAAA CCATGGGCGT GGTCGGGGCC
GGTTTGCACG CGGATGATGA ATACATCGAG CTGTCGAGCA TTGCGCCAAG GCTTTATTTG
ACGGTCGCGT TGATCACGCA ATTGTCGCAG GCTGTTGCCG CGCCCTGA
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| Protein sequence | MHSRSFPTVA ALGFSLLSLG ALAADLSPDQ LLNKAQAEQK AYLATVKELV GVDTGTGQAP
GLKTVSALLV ERLKALGAEV TTTPANPSAG DNIVGTFKGN GTRSFLLMVH YDTVFGPGTA
ARRPFRLDSE RAYGPGVADA KGGVAMILHS LKLLQDEQFK DFGTLTVLFN PDEETGSSGS
KKVIAELARQ NDYVFSYEPP DKDAVTVATN GINGLLLDVK GKSSHAGSAP EAGRNAAIEL
AHQMLQLKDL GDPGKGTTVN WTLIKGGEKR NIIPSSASAE ADMRYSDPSE SDRVMADGQR
LVRKTLVDGT EVTLRMEKGR PPLAKNPGSE QLAKTAQTLY AKIGRSIEPI AMRFGTDAGY
AYVPDSAKPA VLETMGVVGA GLHADDEYIE LSSIAPRLYL TVALITQLSQ AVAAP
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