Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2092 |
Symbol | |
ID | 1183738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2262447 |
End bp | 2263874 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637393470 |
Product | tail fiber domain protein |
Protein accession | NP_791915 |
Protein GI | 28869296 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.147761 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTGGT ATAAGACCGG GACGGTTTCC GTCACCCAAA ATTCAAACGC CGTTATTGGC ATTGGTACGG CATTCATTGC AAACAGCCGC GTCGGCGATG GCTTTCGTGG CCCGGATGGC GGCTGGTACG AGGTGACGAA CATCGCCAGT GATACGGCCA TGTCGATATC GCCAAACTAT CAGGGTGCTA CCAACGGCGC GGGCGGGTAT GCGCTGGCTC CGCTGCAGGG CTACGTGCAG GCTTCCGCCG ATGCGCTGCG CGCTCTGGTC CTTCAGTACG GCCAGAAGCT GGCCGCGCTG GGCACGACCG GGAACTACGA CATTCTGCCG ATTGCCAAAG GCGGGACCGG CGCTACTGAT GGTGCCACGG CGCTCGTAAA CCTTGGGCTG AGAGGCGGTG CCAACGATCT GCTGGTCAAG AGTATTGGCT TTCGCGGCAC GCCCGTCGGA TACAATATTC AAGGCCTGTA TATGGGCTGG AACGGCAATG GCGACGGGGG CGCGAACTAC ATCTGTAATC GCGGGGGCGC GGGCGGCGGG CATTCCTGGT GGTCTGTGAA CTCGGACAAT ACGGCTGCTG GGCCGGTGAT GACTTACTCC TATGCCGGCG TTCTTTCCGT CGCCCAACTT AGCGTCACTG CCAGCCCTAT TGCGATTTCG TCTGGCGGAA CAAGCGCAAA TACAGCGGCG GGAGCCAGAA CAAATCTCGG GCTTGGGAGT GCAGCGATTG AAAATACAGT GCCGATCACA AAGGGCGGTA CTGGTGGCAC AGATGGACCC AGCGCACGCT CCGGGATAGG TCTCGGCACA ACCGATGTCG CTACCTTCAG GGCGCTGGAG CTGACCCACA CAACCCCGTG GATCGATTTT CACTTCAACA ACACGGCCGC TGACTATGAC GTCCGCCTGA TCAATGACTC AGCCGGAACG CTGACGCTCG ATGGTCGACT TGCATCGAAA GGAACGTGGT GCCGAACCGG TCTGAATGGT TCAAGAGGCG CTAATATTTA CAACCTCAAC TGGAATACAA GCAATAGCGG TTATGTAGAC GTTTACATTG ATGCAAGTTA TGTTGGGGCT CTTACTTTGC TTCAATCCGA TTACCGGGTT AAGCGTCAAG TAGAAGAGTT TTCCGCTCCG TTCCTTGAAA GAGTAAACGC CTACAGGATA GTTACATTCA AGAGAGCTGC ATACGGAGAA GTCTTCAAGG ACGGAGAAAA TCTTATTCAA GGTCTGATTG CCCATGAAGT CCAAGAGATC AACCCTCTGG CGGCGACAGG AAAGAAAGAC GACGTAGATG CGAATGGGAA CATTTGGATT CAGCAGCTTG ATTCTATAGC ACTAATTACA GACGCATTCG GGGCTATAAA GGAGCTTAGC GTGCAGGTTA AAAAGCTGCG CGCCGAACTG GACGCACTAA AGGCATAA
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Protein sequence | MPWYKTGTVS VTQNSNAVIG IGTAFIANSR VGDGFRGPDG GWYEVTNIAS DTAMSISPNY QGATNGAGGY ALAPLQGYVQ ASADALRALV LQYGQKLAAL GTTGNYDILP IAKGGTGATD GATALVNLGL RGGANDLLVK SIGFRGTPVG YNIQGLYMGW NGNGDGGANY ICNRGGAGGG HSWWSVNSDN TAAGPVMTYS YAGVLSVAQL SVTASPIAIS SGGTSANTAA GARTNLGLGS AAIENTVPIT KGGTGGTDGP SARSGIGLGT TDVATFRALE LTHTTPWIDF HFNNTAADYD VRLINDSAGT LTLDGRLASK GTWCRTGLNG SRGANIYNLN WNTSNSGYVD VYIDASYVGA LTLLQSDYRV KRQVEEFSAP FLERVNAYRI VTFKRAAYGE VFKDGENLIQ GLIAHEVQEI NPLAATGKKD DVDANGNIWI QQLDSIALIT DAFGAIKELS VQVKKLRAEL DALKA
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