Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2081 |
Symbol | |
ID | 1183727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2254123 |
End bp | 2254575 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637393459 |
Product | hypothetical protein |
Protein accession | NP_791904 |
Protein GI | 28869285 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000634214 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTATG AGCAGATCCG CAGAGCTATC ACGGCGCGCA TGGTGGCCTT CACCGGGATT GAGCAGGAAC GCATTTTCTA TCCCAACGCT CAGTACCCGG CTCAGAACCA AGACGGCTCA GGCGTGTTCA AGCCGCCTGC CGACGGCCTA TGGTGCCGCC TACACATCCA GCACGCCACC GCCTTCATGG CCGGCATGGC CGACCAGCCC TACACCCGAA AGCCCGGCAT TATCGTCGTG CAGTGCTTTG CCCGGCTTCG CACCGGCATG CGCGGCCTGA ATGAACTGGC CGACGCACTG GAAGCGCACT TTGCCTACTG GACTGAAGGC GACCTTGAGT GCATCGAGGC CAGCCAGGTC GACGCAGGCG AGTACGAAGG CTTCTATCAG ATCAACGTGA ATATCCGGTT TCCGCGCCGG TTGAACCTGA AGCACCCATC CGGCCCGCCT TGA
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Protein sequence | MTYEQIRRAI TARMVAFTGI EQERIFYPNA QYPAQNQDGS GVFKPPADGL WCRLHIQHAT AFMAGMADQP YTRKPGIIVV QCFARLRTGM RGLNELADAL EAHFAYWTEG DLECIEASQV DAGEYEGFYQ INVNIRFPRR LNLKHPSGPP
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