| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2061 |
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| Symbol | |
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| ID | 1183706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2241920 |
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| End bp | 2242750 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393439 |
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| Product | transglutaminase-like domain protein |
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| Protein accession | NP_791884 |
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| Protein GI | 28869265 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0989032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACTCT CTATAAGCCA CGAAACCACC TATCACTATG ATGATCAGGT GCGTTCCAGT
ATCCAGTACC TGCGCCTGAC GCCTCATGAC AGCGAGCGTC AGCAAGTGCT TAGCTGGCAG
TTGACGCTGC CACGCCCGGT GCGTGCGCAG ATCGATCCAT TTGGCAACAT CCTGCACGTC
CTGAGCCTTG AAGAACCGCA CGAGGCGATC ATCATCGGCG CGCGTGGGCA GGTGGAAATC
GACGAGACCC GCGAGGCCGA GCACGAAAGC CAGTCAGCGC TGCCGTTCTT GCGCGTCACC
CGGCTGACCG AACCTGACGA AGCGATTCGC AGTTTCGCCG CCAAAGAATG TCGCAAGCGT
ACTGACCGTA CTGCCTTGAT CGATTTGATG CAGGCGCTCA ATCAGCACAT GACCTACACG
CAGGGCGCAA CCGAAGTCGA CACCAGCGCC GCTCAGGCGT TTGCCGGGCG CTCCGGGGTC
TGTCAGGACC ATACCCACGC TTTTCTGGCC TGCGCGCGCA GCCTCGGCGT GCCTGCACGC
TATGTGTCCG GCTACCTGTG CAGCGAAGAC AGCGAACACC TGTCCAGTCA TGCCTGGGCC
GAAGCGTGGA TTGACGATGC GTGGTACAGC TTCGATGTGA CTAACCAGTT GGCCATTCCC
GAGCGCCATT TGAAACTGGC GGTAGGGCTG GATTATCTGG ATGCCTGTCC GGTGCGCGGC
ATGCGCCGTG GCGGCGGATC GGAACAGATG CACGCCAAGG TGGTGGTTTC GCCCATGACC
GGTACGCCCA AGGTGAAAAC CCGAGTGCAG GTTCAGACGC AGCATCAGTG A
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| Protein sequence | MRLSISHETT YHYDDQVRSS IQYLRLTPHD SERQQVLSWQ LTLPRPVRAQ IDPFGNILHV
LSLEEPHEAI IIGARGQVEI DETREAEHES QSALPFLRVT RLTEPDEAIR SFAAKECRKR
TDRTALIDLM QALNQHMTYT QGATEVDTSA AQAFAGRSGV CQDHTHAFLA CARSLGVPAR
YVSGYLCSED SEHLSSHAWA EAWIDDAWYS FDVTNQLAIP ERHLKLAVGL DYLDACPVRG
MRRGGGSEQM HAKVVVSPMT GTPKVKTRVQ VQTQHQ
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