Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2045 |
Symbol | |
ID | 1183690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2228465 |
End bp | 2229079 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637393423 |
Product | class II aldolase/adducin domain protein |
Protein accession | NP_791868 |
Protein GI | 28869249 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | [TIGR03328] methylthioribulose-1-phosphate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0362341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGCG AACAACTGAG TCAGGAGATC ATCGAAGCAG GGCGGTTCCT GTATGGTCGT GGCTGGTCGC CTGCCACCAG CAGCAATTAC TCCGTGCGCC TGTCGGCCAG CGAGGCGTTG CTGACCGTGT CCGGCAAGCA CAAAGGCCAG CTGGGGCCGG ATGATGTGCT GGCGACAGAC CTCGCTGGCA ACAGCCTGGA GCCCGGCAAA AAGCCGTCTG CGGAAACCTT GCTGCACACC CAGCTTTACC TGTGCAGGCC GCAGGTCGGC GCAGTGCTGC ACACCCACTC GGTGAATGCG ACGGTGCTGT CCAGGCTGAC GGCCTCAGAC CATCTGGTGT TCGAGGACTA CGAGCTGCAA AAAGCCTTCA ACGGCGTGCT GACCCACGAG TCGCAGGTTG TCGTGCCGAT TTTCGACAAT GATCAGGACA TCGCCCGGCT TGCCGCAAAC GTGCAGCCTT GGCTGGACGC TCATCCCGAG TGCGCCGGCT ACCTGATTCG CGGCCACGGG CTCTACACCT GGGGCGCAAG AATGAGCGAC GCACTGCGCC AGATCGAAGC GTTCGAGTTT CTGTTCGAGT GCGAGCTGAA GATGCGTACG GTCATGAACC GTTAA
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Protein sequence | MSREQLSQEI IEAGRFLYGR GWSPATSSNY SVRLSASEAL LTVSGKHKGQ LGPDDVLATD LAGNSLEPGK KPSAETLLHT QLYLCRPQVG AVLHTHSVNA TVLSRLTASD HLVFEDYELQ KAFNGVLTHE SQVVVPIFDN DQDIARLAAN VQPWLDAHPE CAGYLIRGHG LYTWGARMSD ALRQIEAFEF LFECELKMRT VMNR
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