| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2044 |
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| Symbol | |
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| ID | 1183689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2227299 |
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| End bp | 2228468 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637393422 |
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| Product | transporter, putative |
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| Protein accession | NP_791867 |
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| Protein GI | 28869248 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0012947 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGCCAA CGCCCGACGG GCAGTTGCCG TATTGGCGGC TGTCCGGGTT CTATGTGTGT
TATTTCGCCT TGCTCGGCTC GGCGGCGCCC TTCATGGCGC TTTACCTGCA TCACCTGGGT
TTTGCCAGTG CCCGAATCGG CGAACTTGTC GCTATCCCCA TGCTGATGCG CTGTGTCGCG
CCCAATATCT GGGGCTGGCT GGGTGACCAC ACCGGGCGGC GGTTGTTGAT TGTGCGCTTT
GGTGCGCTCT GCACGCTGCT GGCGTTCTCG CTGATTCTGA TCGATAAAAG CTATGCCTGG
CTGGCGATGG TCATGGCGCT GTATGCATTC TTCTGGCACG CCATCCTCCC GCAGTTTGAA
GTCATCACCC TCGCGCACCT GCAAGGCCAG ACCTCGCGCT ACAGCCAGAT CAGGCTATGG
GGCTCGATCG GCTTCATTCT GGCGGTCGTG GTGCTGGGAC GGGTGTTTGA ATGGTTCAGC
CTGGACCTGT TTCCCTATAT CTTGCTGGCG ATCATGGCCG GCATCGCAGT CAGCAGCTGG
TGGGTGCCCA ATGCGCAACC GCTGACTTCG ACCCCGCAGG CAGAGGCGCA GGCGGGCGGC
TTTCTCAAGC AACTGATGCG GCCGGGTGTG TGGGTGTTCT ACATCAGTGT TGCGCTGATG
CTGCTCAGCC ACGGCCCGTA TTACACCTTT CTGACCTTGC ACCTGGAGGC GCTTGGTTAC
AGCCGCGGCC TGATCGGCAT GCTGTGGGCA GTCGGCGTGG TGGCTGAAGT GCTGATGTTC
ATGGCCATGA GCCGCATCCT CCATAGGTTT TCCGTGCGCC AGGTCCTGTT CGCCAGTTTC
CTGCTCGCCG CATTACGCTG GCTGTTGCTC GGCATGTTCG CCGAGCACCT GCCTGCGCTG
TTGATTGCGC AGGTGATGCA CGCCGCCACC TTCGGCAGCT TTCACGCCGC TGCCATCCAT
TTCGTGCAAC GTAGCTTCGG CCCGCGTCAG CAAGGTCAGG GGCAGGCGCT GTATGCCGCC
TTGTCCGGTG TGGGCGGCGC GTTGGGTGCC TTGTACTCGG GCTACAGCTG GAACGCGCTG
GGGCCGGCCT GGACATTTGC TATCGCCAGC CTTGCGGCCT TTGCTGCAGC CGTCATGATT
GTCACATCCA GAAAAGAGGA AGGCGTATGA
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| Protein sequence | MTPTPDGQLP YWRLSGFYVC YFALLGSAAP FMALYLHHLG FASARIGELV AIPMLMRCVA
PNIWGWLGDH TGRRLLIVRF GALCTLLAFS LILIDKSYAW LAMVMALYAF FWHAILPQFE
VITLAHLQGQ TSRYSQIRLW GSIGFILAVV VLGRVFEWFS LDLFPYILLA IMAGIAVSSW
WVPNAQPLTS TPQAEAQAGG FLKQLMRPGV WVFYISVALM LLSHGPYYTF LTLHLEALGY
SRGLIGMLWA VGVVAEVLMF MAMSRILHRF SVRQVLFASF LLAALRWLLL GMFAEHLPAL
LIAQVMHAAT FGSFHAAAIH FVQRSFGPRQ QGQGQALYAA LSGVGGALGA LYSGYSWNAL
GPAWTFAIAS LAAFAAAVMI VTSRKEEGV
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