| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2034 |
|---|
| Symbol | |
|---|
| ID | 1183679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 2219685 |
|---|
| End bp | 2220062 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637393412 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_791857 |
|---|
| Protein GI | 28869238 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0695] Glutaredoxin and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.144107 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTGT TCATGAAAGC GTTAAGAGTC GGCCTTGGCC AACTCGTTAT CGGCATCGAC
TTTTTGACCC GCCCGAGCAA GAAAAAGCGT GATCCCAAGG CTCAGGCCGC TGTTGCTGAA
GCGGCTCGGA ACCTGACGCT TTATCAATTT CATGCCTGCC CGTTCTGCGT AAAGACCCGA
CGCACCCTGC ATCGCCTCAA CGTTCCTGTC GCACTGCGCG ATGCGAAGAA CAATGAGCTT
GATCGCCAGA CGCTGCTCAA CGAAGGCGGC AAGATCAAAG TGCCTTGCCT GCGCATCGAA
GAAGGCGGAA AAACGGTCTG GATGTACGAG TCCAAAGTGA TCATCGATTA CCTGGACCAA
CGCTTCGGCG CGATCTGA
|
|---|
| Protein sequence | MTVFMKALRV GLGQLVIGID FLTRPSKKKR DPKAQAAVAE AARNLTLYQF HACPFCVKTR
RTLHRLNVPV ALRDAKNNEL DRQTLLNEGG KIKVPCLRIE EGGKTVWMYE SKVIIDYLDQ
RFGAI
|
|---|
| |