| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2016 |
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| Symbol | acnA |
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| ID | 1183661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2202961 |
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| End bp | 2205705 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637393394 |
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| Product | aconitate hydratase 1 |
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| Protein accession | NP_791839 |
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| Protein GI | 28869220 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01341] aconitate hydratase 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.644961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTCCC TCGATAGCCT GAAAAGCCTG AAAACACTCG ACATCGATAA CAAGACCTAC
CACTACTTCA GCCTGCCGGA AGCCGCCCGC TCGCTCGGCG ACCTGGACAA GCTGCCCATG
TCGCTCAAGG TGCTGCTGGA AAACCTGCTG CGCTGGGAAG ACAACAAGAC CGTCACCGGC
AACGACCTCA AGGCCATCGC CGACTGGCTG ACCGAGCGCC GCTCGGACCG GGAAATCCAG
TACCGCCCCG CCCGTGTGCT GATGCAGGAC TTTACCGGCG TGCCTGCAGT GGTCGATCTG
GCCGCCATGC GCGCTGCCGT GGCCAAGGCA GGTGGCGATC CGCAGCGGAT CAATCCGCTG
TCGCCGGTCG ATCTGGTCAT CGACCACTCG GTGATGGTCG ACAAGTTCGG CAACGCCGAG
GCGTTCGGTG AGAACGTCGA CATTGAAATG CAGCGCAACG GCGAGCGCTA TGCGTTTCTG
CGTTGGGGCC AGAGCGCCTT CGACAACTTC AGCGTCGTGC CGCCCGGCAC CGGTATTTGC
CATCAGGTGA ACCTGGAATA CCTGGGCCGC ACTGTCTGGA CCAAAGAGCA AGACGGTCGT
ACCTACGCGT TCCCCGACAC GCTGGTCGGC ACTGACTCGC ACACCACGAT GATCAACGGC
CTTGGCGTAT TGGGCTGGGG CGTGGGCGGG ATCGAAGCCG AGGCGGCGAT GCTCGGCCAG
CCGGTATCGA TGCTGATCCC GGAAGTGATC GGTTTTAAAC TGACCGGCAA ATTGAAAGAA
GGTATTACCG CCACCGATCT GGTGCTGACC GTAACGCAGA TGCTGCGCAA GAAAGGCGTG
GTCGGCAAGT TCGTCGAATT CTATGGCGAT GGCCTGGCGG ATCTGCCACT GGCCGACCGT
GCGACCATTG CCAACATGGC TCCGGAGTAT GGCGCGACCT GCGGTTTCTT CCCGGTCGAC
GAGGTGACGC TGGATTACCT GCGCCTGTCC GGCCGCCCCG ACGAGACCGT GAAGCTGGTC
GAGGCCTATT GCAAGGCGCA AGGGCTGTGG CGTCTGGCAG GTCAGGAACC GGTGTTCACC
GACAGCCTGG AACTGGACAT GACCACCGTG GAAGCCAGCC TCGCCGGCCC CAAACGTCCG
CAAGACCGCG TGGCGTTGCC ACAGGTGGCC AAGGCGTTTG ATGACTTTCT CGGTTTGCAG
GTCAAGCCGG CCAAGGTCGA CGAGGGCCGG CTGGAAAGCG AGGGCGGCGG CGGTGTCGCG
GTGGGCAACG AAGCACAGGT CGGTGGCGAA ACCCAGTATG AATACAACGG CCAGACCTAC
CCTCTGAGAG ACGGCGCGGT GGTGATCGCG GCCATCACCT CCTGCACCAA TACCTCCAAC
CCCAGTGTGA TGATGGCCGC CGGCCTGGTG GCGAAAAAAG CGGTCGAAAA AGGCCTGCAA
CGCAAACCTT GGGTGAAGAG CTCGCTGGCA CCTGGCTCCA AGGTTGTGAC CGATTACTAC
GACGCAGCGG GCTTGACACC TTATCTGGAA ACGCTGGGCT TCAATCTGGT GGGCTATGGC
TGCACGACCT GCATCGGTAA CTCCGGGCCG CTGCTGGAGC CGATCGAAAA AGCCATTCAG
CAGTCCGACC TGACCGTCGC CTCCGTGCTG TCGGGTAACC GCAACTTCGA GGGCCGCGTC
CATCCGCTGG TCAAGACCAA CTGGCTGGCC TCGCCACCCC TGGTGGTGGC GTACGCGCTG
GCAGGTTCGG TGCGCACCGA CATCAGCAGT GAACCGCTGG GCGAAGGCTC GGACGGCAAA
CCGGTTTACC TACGCGACAT CTGGCCCAGC CAGCAAGAGA TCGCCGACGC AGTCGCAAGC
GTGAACACCG GGATGTTCCA CAAGGAATAC GCCGAAGTCT TTGCCGGCGA CGAGCAGTGG
CAAGCCATCG AGGTGCCGCA GGCTGCCACT TATGTCTGGC AGGAAGACTC CACCTACATT
CAGCACCCGC CGTTCTTCGA AGACATCGGC GGCCCGCTGC CCGTGATCGA AGATATAGAA
GACGCACGCA TTCTGGCGCT GCTGGGCGAT TCGGTAACCA CCGACCACAT CTCCCCTGCC
GGCAATATCA AAGCGGACAG CCCGGCCGGC CGCTATCTTC AAGAGAAAGG CGTCGCGTAT
CAGGACTTCA ACTCATACGG TTCACGCCGT GGCAACCATG AAGTGATGAT GCGCGGCACC
TTTGCCAACA TCCGTATCCG CAACGAAATG CTCGGTGGCG AAGAAGGCGG CAACACGGTG
CACGTACCTT CCGGCGAAAA ACTGGCGATC TACGACGCGG CCATGCGCTA TCAGGCTGAA
AGTACACCGC TGGTGATCGT CGCGGGCCTG GAATACGGCA CCGGATCGAG CCGCGACTGG
GCGGCCAAAG GCACCAATCT GCTGGGCGTG AAGGCGGTCA TTGCCGAAAG TTTTGAGCGG
ATTCACCGCT CCAATCTGGT CGGCATGGGC GTGCTGCCGT TGCAATTCAA AAACGGTCAG
ACCCGCAAGA CATTGGCCCT TACCGGCAAG GAAACCCTGA AAATCACCGG CCTGACCAAC
GCCGACGTGC AACCAGGCAT GAGCCTGACC CTGCACATCA ACCGCGAGGA CGGCAGCAAG
GAAACGGTCG ACTTGCTGTG CCGCATCGAC ACGCTTAACG AAGTGGAATA CTTCAAGTCC
GGCGGCATTC TGCATTATGT GCTGCGGCAA CTGATCGCTT CGTGA
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| Protein sequence | MPSLDSLKSL KTLDIDNKTY HYFSLPEAAR SLGDLDKLPM SLKVLLENLL RWEDNKTVTG
NDLKAIADWL TERRSDREIQ YRPARVLMQD FTGVPAVVDL AAMRAAVAKA GGDPQRINPL
SPVDLVIDHS VMVDKFGNAE AFGENVDIEM QRNGERYAFL RWGQSAFDNF SVVPPGTGIC
HQVNLEYLGR TVWTKEQDGR TYAFPDTLVG TDSHTTMING LGVLGWGVGG IEAEAAMLGQ
PVSMLIPEVI GFKLTGKLKE GITATDLVLT VTQMLRKKGV VGKFVEFYGD GLADLPLADR
ATIANMAPEY GATCGFFPVD EVTLDYLRLS GRPDETVKLV EAYCKAQGLW RLAGQEPVFT
DSLELDMTTV EASLAGPKRP QDRVALPQVA KAFDDFLGLQ VKPAKVDEGR LESEGGGGVA
VGNEAQVGGE TQYEYNGQTY PLRDGAVVIA AITSCTNTSN PSVMMAAGLV AKKAVEKGLQ
RKPWVKSSLA PGSKVVTDYY DAAGLTPYLE TLGFNLVGYG CTTCIGNSGP LLEPIEKAIQ
QSDLTVASVL SGNRNFEGRV HPLVKTNWLA SPPLVVAYAL AGSVRTDISS EPLGEGSDGK
PVYLRDIWPS QQEIADAVAS VNTGMFHKEY AEVFAGDEQW QAIEVPQAAT YVWQEDSTYI
QHPPFFEDIG GPLPVIEDIE DARILALLGD SVTTDHISPA GNIKADSPAG RYLQEKGVAY
QDFNSYGSRR GNHEVMMRGT FANIRIRNEM LGGEEGGNTV HVPSGEKLAI YDAAMRYQAE
STPLVIVAGL EYGTGSSRDW AAKGTNLLGV KAVIAESFER IHRSNLVGMG VLPLQFKNGQ
TRKTLALTGK ETLKITGLTN ADVQPGMSLT LHINREDGSK ETVDLLCRID TLNEVEYFKS
GGILHYVLRQ LIAS
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