Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2007 |
Symbol | |
ID | 1183652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2189494 |
End bp | 2191350 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637393385 |
Product | hypothetical protein |
Protein accession | NP_791830 |
Protein GI | 28869211 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTGGGGT ATTTTGCCAA ATCAGGAAAC CTTTTTCAGA GTTTCCTTAA CAAACCTGTT CAGGTATCGC TGTCAGTGTG GCCAGGCGCA CAGACTGGCT ACACTTATCA ACTTTATTTC GATGACACGC TTATTGAACC AAAAAAAGAA ATACTGGCGA GCCATAAGCC TGGGGACCCC CTTAGCCTGG AGATCCCAAA AGAATTGCTA AAAGAAGGCA ATCACACAGT CGCTTACGCC ATCGAAAACC CTGGGAACAT GGTTGTTGAG TTTTCAGAAA ATACAATCGT ATCCGTGGAC ATCACTCAAC CCGGCGCTCC GACTCTCGCC CCCATCATCC TCCCCAGACA AACCCTGAAC GGCCTCACCT CCGAAGAACT GGAAAACATG GGTGATGTCC TGACGGGCAC GATTGCCGGT TACAACGGCA TGCAGGAAGG CGATGTCGTC CGTACCTACT GGAACGACTT ACCGGGCCCG ATGGCAGTGG TCACCAAAGA CGATATGGGC CTTAAGTGTG TAATGGTCTA CTTTGTCAGG CCGTTTCTGG AGCTGATTGG TGATATCGAA GCGCCGGTTT ACTACACAGT GACCGACCTG GCTGGCAATC AGTCCATGGC CTCAGAAACC CTGGACGTAA AGCTCCAGCT CACGGTGACA ACGCCCCTGC CCACCCCAAC CATAAAAGAA GCCACCGGCA GCACCCTGGA CCCTATCAAC GCCTCCGCCG GGGCAACAGT GGTCATCGAG GCCACCGCCA ACCTGAAAAC CGGCGACCAG GTGATTGTGC AATGGCAGGG GCCGAAAGGC AGTGATACCA AGGAGAAGAC ACTGACAAGC GCTGAAGCCG GTCAGGCGCT GGAGGTGCTG TTTGCCGCTG TTCTGGTGAC TGCCAACGCC GGGCAGACGG TTTCGGTCTC CTACGTCGTG AACCGCACCA ACGGTCTGGT GCAGGTATCC GATACTTTGG CGCTGCAGGT TGTGAGCGGG CTGGCCGAGT TGCCTGCACC GCGCATGGAT ACGGTCGGGG CAGACGGCGT GGTCACGCCT TCGCTGATTC CTGGCTACGG CGCAACGGTG CGGGTGAGTT ATCCGGGCGT GGGCGCGCAG GACAGTGTGG TGGTCAACTG GCGCGGCGCG TCCAGCCATG ACACGGCGGC GCAGGTTGCA GGGGGTGGCG AATTGCAGTT CAACGTGCCC AAGGCGTTGA TCAGCGCCAC TGCAGGCCGC TCTGCCACGG TGACTTACAC CGTAACCCGC GCAGGGGAGC CCACTGTATC GACCGCGCTA CAGCTCAGTG TCAGACAGGA GCTGGTACTG GACACTTCAC CGGTAACACT GGCCGGCAAA ATCTATCTGC TTCCGGGCTC ACCGGACCTG TTGCCGAACT TCCCGGCCGA TACCACCGTT CAGCGCCAGG CCAGCGGCGG GCATGCGCCT TATCGATACG CATCGAGTAA TCCGCTGGTG GTGAGCGTGG ACGGCAATGG CCTGGCTTCT GTTCGAGGTA AAGGTACGGC CACCATTACC GCAACCGATG CGCTGGGCGC GACCAAGAGT TATCCGGTCA CTGTTACCGG CGTCATCCAT TGCATCGGTG TGGGCAGTGG CAGCTTCTCT CAGATCAGCA AGGCATCGGC CAATAATGGC GCGCGGATTC CGACCATTCA CGAGTTGGTG GAAATCTACG CCCTGTACGG CAATCGCTGG CCGATGGGCA ACGGCAATTA CTGGTCGTCT ACCGTTTCAA GCGCGGGTAT CGGGGGATGG AACTGGTACT ACGTAAAAAA CATGGTCTCT GGCGGGAACT TCAAGTTGAA GAGTCACAAC TCCAGCCTTG GCGTTTGTAT CAAATAA
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Protein sequence | MLGYFAKSGN LFQSFLNKPV QVSLSVWPGA QTGYTYQLYF DDTLIEPKKE ILASHKPGDP LSLEIPKELL KEGNHTVAYA IENPGNMVVE FSENTIVSVD ITQPGAPTLA PIILPRQTLN GLTSEELENM GDVLTGTIAG YNGMQEGDVV RTYWNDLPGP MAVVTKDDMG LKCVMVYFVR PFLELIGDIE APVYYTVTDL AGNQSMASET LDVKLQLTVT TPLPTPTIKE ATGSTLDPIN ASAGATVVIE ATANLKTGDQ VIVQWQGPKG SDTKEKTLTS AEAGQALEVL FAAVLVTANA GQTVSVSYVV NRTNGLVQVS DTLALQVVSG LAELPAPRMD TVGADGVVTP SLIPGYGATV RVSYPGVGAQ DSVVVNWRGA SSHDTAAQVA GGGELQFNVP KALISATAGR SATVTYTVTR AGEPTVSTAL QLSVRQELVL DTSPVTLAGK IYLLPGSPDL LPNFPADTTV QRQASGGHAP YRYASSNPLV VSVDGNGLAS VRGKGTATIT ATDALGATKS YPVTVTGVIH CIGVGSGSFS QISKASANNG ARIPTIHELV EIYALYGNRW PMGNGNYWSS TVSSAGIGGW NWYYVKNMVS GGNFKLKSHN SSLGVCIK
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