Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1999 |
Symbol | |
ID | 1183644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2183895 |
End bp | 2184347 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637393377 |
Product | PIN domain protein |
Protein accession | NP_791822 |
Protein GI | 28869203 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0463072 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCCTGC TCGACACCAA CGTGGTGTCC GAACTCAGAA AACGCAATGC CGACGCGAAC GTGCTCCGCT GGTCGCGAAC CCAGATGGCA TCCAGCCTGT TCATCTCGTC CATCACGATT CTTGAGCTCG AAACAGGTAT CCTGCGGGTC GAACGCCGTG ATCCGACACA AGGCGCAGCC CTGCGAATGT GGCTCGACCA CCATGTATTG AAAGCCTTCG CCGGGCGCAT TCTGCCAATC GACACCCAGG TCGCAAAACG CTGTGCCCAA CTGCACGTGC CCGACCCGCG CAGCGAATGT GATGCCCTGA TCGCCGCCAC AGCGCTGGTG CACGGCATGA CCGTGGTCAC CCGCAACACA GCAGATTTCA AATCTAGCGG AGCCGCCTTG CTTAATCCCT GGATCAGCCA GTTGAACGAA GAAACGGCCT ATTACTCAAG TGCGTCACGT TGA
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Protein sequence | MFLLDTNVVS ELRKRNADAN VLRWSRTQMA SSLFISSITI LELETGILRV ERRDPTQGAA LRMWLDHHVL KAFAGRILPI DTQVAKRCAQ LHVPDPRSEC DALIAATALV HGMTVVTRNT ADFKSSGAAL LNPWISQLNE ETAYYSSASR
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